CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo3g074810
(
Brassica oleracea
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Bo3g074810
T244974_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g074810.1
LOB
527
615
IQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELI
Links
Other
LOB
family TFs
Other
Brassica oleracea
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
APUM5
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3001929
N
0.888
APUM5
Arabidopsis thaliana
AT3G20250
N
0.888
Bo5g109920
Brassica oleracea
Bo5g109920
N
0.901
Bra035800
Brassica rapa
Bra035800
N
0.901
Cagra.0316s0041
Capsella grandiflora
Cagra.0316s0041
N
0.987
Carubv10012910m.g
Capsella rubella
Carubv10012910m.g
N
0.974
Thhalv10020002m.g
Eutrema salsugineum
Thhalv10020002m.g
N
1.000
SELMODRAFT_78497
Selaginella moellendorffii
SELMODRAFT_78497
N
0.713