CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra027392
(
Brassica rapa
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Bra027392
T245071_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra027392.1-P
LOB
1
42
MHTIMFQSDARANDPIEGCYSIIRRLQYEIEYNKNELDMVLH
Links
Other
LOB
family TFs
Other
Brassica rapa
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LBD22
Arabidopsis lyrata
fgenesh2_kg.3__1489__AT3G13850.1
N
0.738
Carubv10014142m.g
Capsella rubella
Carubv10014142m.g
N
0.762
cassava2716.m1
Manihot esculenta
cassava2716.m1
N
0.714
cassava34925.m1
Manihot esculenta
cassava34925.m1
N
0.714
cassava34926.m1
Manihot esculenta
cassava34926.m1
N
0.714
Pm013344
Prunus mume
Pm013344
N
0.738