CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR03G03460 *(Leersia perrieri)* LOB
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03195 (DUF260)	IPR004883	LPERR03G03460	T245391_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
LBD16 M00870_2.00	Arabidopsis thaliana	DNHHYVCGG	CCGBRDDNH	PBM Franco-Zorrilla et al.(2014) LBD16	0.717	0.717
LBD16 M06958_2.00	Arabidopsis thaliana	SCGGAAAWNVCGSMR	YKSCGBNWTTTCCGS	Dap-seq OMalley et al.(2016) ASL18_col_a	0.717	0.717
LBD16 M06959_2.00	Arabidopsis thaliana	SCDBDWTTYVCGSHDN	NHDSCGBRAAWHVHGS	Dap-seq OMalley et al.(2016) ASL18_colamp_a	0.717	0.717
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR03G03460.1	LOB	14	113	PCGACKFLRRKCAAECVFAPYFCAEDGAAQFAAIHKVFGASNAAKLLQHVDPSDRSEVAATVTYEAQARLRDPVYGCVAHIFALQQQLATLQVQVAQAKT

Links
Other LOB family TFs
Other *Leersia perrieri* TFs