29613.m000372 (Ricinus communis)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 29613.m000372 T246405_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29613.m000372 LOB 5 103

Links

Other LOB family TFs
Other Ricinus communis TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.0556s0333 Boechera stricta Bostr.0556s0333 I 0.707
evm.TU.supercontig_1.335 Carica papaya evm.TU.supercontig_1.335 I 0.798
evm.TU.supercontig_1.339 Carica papaya evm.TU.supercontig_1.339 I 0.808
Ca_16884 Cicer arietinum Ca_16884 N 0.747
Ciclev10006868m.g Citrus clementina Ciclev10006868m.g N 0.737
orange1.1g038129m.g Citrus sinensis orange1.1g038129m.g N 0.737
Cucsa.250990 Cucumis sativus Cucsa.250990 N 0.737
Cucsa.161230 Cucumis sativus Cucsa.161230 N 0.727
Eucgr.A02814 Eucalyptus grandis Eucgr.A02814 I 0.798
gene26806-v1.0-hybrid Fragaria vesca gene26806-v1.0-hybrid N 0.747
GLYMA14G02440 Glycine max GLYMA14G02440 N 0.707
Gorai.008G280400 Gossypium raimondii Gorai.008G280400 N 0.747
Gorai.009G123600 Gossypium raimondii Gorai.009G123600 N 0.768
LjT39A22.30.nd Lotus japonicus LjT39A22.30.nd N 0.707
MDP0000288452 Malus domestica MDP0000288452 N 0.745
cassava11118.m1 Manihot esculenta cassava11118.m1 I 0.869
cassava35977.valid.m1 Manihot esculenta cassava35977.valid.m1 I 0.828
MTR_5g093010 Medicago truncatula MTR_5g093010 N 0.727
MTR_7g028905 Medicago truncatula MTR_7g028905 N 0.707
mgf017470m Mimulus guttatus mgf017470m N 0.758
POPTR_0015s13870 Populus trichocarpa POPTR_0015s13870 N 0.838
POPTR_0012s13910 Populus trichocarpa POPTR_0012s13910 I 0.848
Pm016263 Prunus mume Pm016263 N 0.778
PRUPE_ppa024504mg Prunus persica PRUPE_ppa024504mg N 0.747
SapurV1A.0068s0590 Salix purpurea SapurV1A.0068s0590 N 0.808
SapurV1A.0400s0200 Salix purpurea SapurV1A.0400s0200 I 0.859
TCM_035123 Theobroma cacao TCM_035123 N 0.788
VIT_16s0100g00440 Vitis vinifera VIT_16s0100g00440 N 0.737