CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10006868m.g
(
Citrus clementina
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Ciclev10006868m.g
T246798_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10006868m
LOB
6
104
RCAACRHLRRRCPSDCIFAPYFPANDPHRFACVHKIYGSSKVGNMLQDLPVELRAEAADAICIEAECRVQDPVYGCVRMISLLQQQIHNAESQLVKARA
Links
Other
LOB
family TFs
Other
Citrus clementina
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g038129m.g
Citrus sinensis
orange1.1g038129m.g
N
1.000
29613.m000372
Ricinus communis
29613.m000372
N
0.737
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
0.707