Bostr.20903s0070 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.20903s0070 T246675_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.747 0.747
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.747 0.747
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.747 0.747
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.707 0.707
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.20903s0070.1.p LOB 13 127

Links

Other LOB family TFs
Other Boechera stricta TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32479 Aegilops tauschii F775_32479 I
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I
EEL Arabidopsis lyrata fgenesh2_kg.4__2235__AT2G41070.2 I
ABF2 Arabidopsis thaliana AT1G45249 D
ABI5 Arabidopsis thaliana AT2G36270 D
EEL Arabidopsis thaliana AT2G41070 I
DPBF3 Arabidopsis thaliana AT3G56850 D
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I
Bostr.9345s0024 Boechera stricta Bostr.9345s0024 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
BRADI4G32090 Brachypodium distachyon BRADI4G32090 I
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I
Bo1g007700 Brassica oleracea Bo1g007700 I
Bo4g012940 Brassica oleracea Bo4g012940 I
Bo6g006970 Brassica oleracea Bo6g006970 I
Bra011485 Brassica rapa Bra011485 I
Bra016953 Brassica rapa Bra016953 I
Bra040260 Brassica rapa Bra040260 I
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I
Carubv10009177m.g Capsella rubella Carubv10009177m.g I
Carubv10023893m.g Capsella rubella Carubv10023893m.g I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
Ca_01548 Cicer arietinum Ca_01548 I
Ca_15706 Cicer arietinum Ca_15706 I
Cla022926 Citrullus lanatus Cla022926 I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10028635m.g Citrus clementina Ciclev10028635m.g I
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
Cucsa.241090 Cucumis sativus Cucsa.241090 I
Cucsa.322810 Cucumis sativus Cucsa.322810 N
Cucsa.364380 Cucumis sativus Cucsa.364380 I
Cucsa.385090 Cucumis sativus Cucsa.385090 I
Cucsa.396070 Cucumis sativus Cucsa.396070 I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I
Thhalv10017050m.g Eutrema salsugineum Thhalv10017050m.g I
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
GLYMA04G04170 Glycine max GLYMA04G04170 I
GLYMA04G14840 Glycine max GLYMA04G14840 I
GLYMA06G04353 Glycine max GLYMA06G04353 I
GLYMA06G47220 Glycine max GLYMA06G47220 I
GLYMA08G24340 Glycine max GLYMA08G24340 I
GLYMA10G08370 Glycine max GLYMA10G08370 I
GLYMA13G22061 Glycine max GLYMA13G22061 I
Gorai.002G240500 Gossypium raimondii Gorai.002G240500 I
Gorai.003G007000 Gossypium raimondii Gorai.003G007000 N
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.006G155600 Gossypium raimondii Gorai.006G155600 I
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I
MLOC_34679 Hordeum vulgare MLOC_34679 I
MLOC_4554 Hordeum vulgare MLOC_4554 I
MLOC_6534 Hordeum vulgare MLOC_6534 I
LPERR01G32620 Leersia perrieri LPERR01G32620 I
LPERR08G14740 Leersia perrieri LPERR08G14740 I
Lus10008927.g Linum usitatissimum Lus10008927.g I
Lus10009755.g Linum usitatissimum Lus10009755.g I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10017049.g Linum usitatissimum Lus10017049.g I
Lus10021369.g Linum usitatissimum Lus10021369.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
Lus10028889.g Linum usitatissimum Lus10028889.g I
LjSGA_023611.1 Lotus japonicus LjSGA_023611.1 I
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I
MDP0000296303 Malus domestica MDP0000296303 I
MDP0000701734 Malus domestica MDP0000701734 I
MDP0000740787 Malus domestica MDP0000740787 I
cassava11518.m1 Manihot esculenta cassava11518.m1 I
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I
cassava16074.m1 Manihot esculenta cassava16074.m1 I
cassava17300.m1 Manihot esculenta cassava17300.m1 I
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I
cassava32856.m1 Manihot esculenta cassava32856.m1 I
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I
MTR_3g010660 Medicago truncatula MTR_3g010660 I
MTR_3g101780 Medicago truncatula MTR_3g101780 I
mgf011003m Mimulus guttatus mgf011003m I
mgf015092m Mimulus guttatus mgf015092m I
mgf020824m Mimulus guttatus mgf020824m I
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I
OBART01G37980 Oryza barthii OBART01G37980 I
OBART08G17810 Oryza barthii OBART08G17810 I
OB01G46760 Oryza brachyantha OB01G46760 I
OB08G24950 Oryza brachyantha OB08G24950 I
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I
BGIOSGA004837 Oryza indica BGIOSGA004837 I
BGIOSGA010835 Oryza indica BGIOSGA010835 I
BGIOSGA020087 Oryza indica BGIOSGA020087 I
BGIOSGA028831 Oryza indica BGIOSGA028831 I
OLONG_000475 Oryza longistaminata OLONG_000475 I
OLONG_014546 Oryza longistaminata OLONG_014546 I
OMERI01G34950 Oryza meridionalis OMERI01G34950 I
ONIVA04G25730 Oryza nivara ONIVA04G25730 I
ONIVA08G19830 Oryza nivara ONIVA08G19830 I
OPUNC05G18710 Oryza punctata OPUNC05G18710 I
OPUNC08G15700 Oryza punctata OPUNC08G15700 I
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I
OS01G0859300 Oryza sativa OS01G0859300 I
OS08G0471950 Oryza sativa OS08G0471950 D
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I
Pavir.J34085 Panicum virgatum Pavir.J34085 I
Pavir.J35078 Panicum virgatum Pavir.J35078 I
Pavir.J38875 Panicum virgatum Pavir.J38875 I
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I
ABI5 Populus trichocarpa POPTR_0006s08300 I
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I
POPTR_0009s16610 Populus trichocarpa POPTR_0009s16610 I
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I
Pm001315 Prunus mume Pm001315 I
Pm005288 Prunus mume Pm005288 I
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I
29625.m000702 Ricinus communis 29625.m000702 I
30055.m001548 Ricinus communis 30055.m001548 I
30170.m013868 Ricinus communis 30170.m013868 I
SapurV1A.0001s2050 Salix purpurea SapurV1A.0001s2050 I
SapurV1A.0016s1330 Salix purpurea SapurV1A.0016s1330 I
SapurV1A.0025s0010 Salix purpurea SapurV1A.0025s0010 I
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0374s0070 Salix purpurea SapurV1A.0374s0070 I
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I
SELMODRAFT_177659 Selaginella moellendorffii SELMODRAFT_177659 I
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I
SELMODRAFT_428822 Selaginella moellendorffii SELMODRAFT_428822 I
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I
Si001731m.g Setaria italica Si001731m.g I
Si002173m.g Setaria italica Si002173m.g I
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I
Solyc09g009490.2 Solanum lycopersicum Solyc09g009490.2 I
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
Sb02g043620 Sorghum bicolor Sb02g043620 I
Sb03g037740 Sorghum bicolor Sb03g037740 I
Sb03g040510 Sorghum bicolor Sb03g040510 I
Sb06g026410 Sorghum bicolor Sb06g026410 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
Sb08g003760 Sorghum bicolor Sb08g003760 I
Sb09g023920 Sorghum bicolor Sb09g023920 I
TCM_022574 Theobroma cacao TCM_022574 I
TCM_033824 Theobroma cacao TCM_033824 I
TCM_044596 Theobroma cacao TCM_044596 I
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I
TRIUR3_29638 Triticum urartu TRIUR3_29638 I
TRIUR3_31111 Triticum urartu TRIUR3_31111 I
DPBF2 Vitis vinifera VIT_06s0080g00340 I
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I
VIT_18s0001g04500 Vitis vinifera VIT_18s0001g04500 I
GRMZM2G077124 Zea mays GRMZM2G077124 I
GRMZM2G157722 Zea mays GRMZM2G157722 I
GRMZM2G159134 Zea mays GRMZM2G159134 I
GRMZM2G161009 Zea mays GRMZM2G161009 I
GRMZM2G168079 Zea mays GRMZM2G168079 I
GRMZM2G478417 Zea mays GRMZM2G478417 I