evm.TU.supercontig_25.41 (Carica papaya)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 evm.TU.supercontig_25.41 T246888_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_25.41 LOB 30 128

Links

Other LOB family TFs
Other Carica papaya TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02643 Aegilops tauschii F775_02643 N
AMTR_s00088p00159600 Amborella trichopoda AMTR_s00088p00159600 N
Aquca_005_00236 Aquilegia coerulea Aquca_005_00236 N
BRADI1G23400 Brachypodium distachyon BRADI1G23400 N
Ciclev10008511m.g Citrus clementina Ciclev10008511m.g N
orange1.1g010604m.g Citrus sinensis orange1.1g010604m.g N
Cucsa.304690 Cucumis sativus Cucsa.304690 N
gene03554-v1.0-hybrid Fragaria vesca gene03554-v1.0-hybrid N
MLOC_4927 Hordeum vulgare MLOC_4927 N
LPERR07G17420 Leersia perrieri LPERR07G17420 N
Lus10003775.g Linum usitatissimum Lus10003775.g N
GSMUA_Achr3G29890_001 Musa acuminata GSMUA_Achr3G29890_001 N
OBART07G20100 Oryza barthii OBART07G20100 N
OB07G25840 Oryza brachyantha OB07G25840 N
OGLUM07G19880 Oryza glumaepatula OGLUM07G19880 N
OMERI07G16780 Oryza meridionalis OMERI07G16780 N
OPUNC07G18990 Oryza punctata OPUNC07G18990 N
OS07G0583200 Oryza sativa OS07G0583200 N
Pavir.J07102 Panicum virgatum Pavir.J07102 N
Pavir.Bb03222 Panicum virgatum Pavir.Bb03222 N
PDK_20s1307431g001 Phoenix dactylifera PDK_20s1307431g001 N
Pm029551 Prunus mume Pm029551 N
PRUPE_ppa015320mg Prunus persica PRUPE_ppa015320mg N
PRUPE_ppa006059m1g Prunus persica PRUPE_ppa006059m1g N
Si029526m.g Setaria italica Si029526m.g N
Solyc12g015640.1 Solanum lycopersicum Solyc12g015640.1 N
Sb02g037620 Sorghum bicolor Sb02g037620 N
Traes_2DS_BCB7C3C11 Triticum aestivum Traes_2DS_BCB7C3C11 N
Traes_2BS_999491428 Triticum aestivum Traes_2BS_999491428 N
Traes_2AS_2C198FE96 Triticum aestivum Traes_2AS_2C198FE96 N
TRIUR3_21656 Triticum urartu TRIUR3_21656 N
GRMZM2G130773 Zea mays GRMZM2G130773 N