CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g038129m.g
(
Citrus sinensis
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
orange1.1g038129m.g
T247164_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g038129m
LOB
1
99
RCAACRHLRRRCPSDCIFAPYFPANDPHRFACVHKIYGSSKVGNMLQDLPVELRAEAADAICIEAECRVQDPVYGCVRMISLLQQQIHNAESQLVKARA
Links
Other
LOB
family TFs
Other
Citrus sinensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10006868m.g
Citrus clementina
Ciclev10006868m.g
N
1.000
cassava35977.valid.m1
Manihot esculenta
cassava35977.valid.m1
I
0.707
29613.m000372
Ricinus communis
29613.m000372
N
0.737