Pavir.J09684 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J09684 T247231_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J09684.1.p LOB 22 120

Links

Other LOB family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04514 Aegilops tauschii F775_04514 N 0.717
LPERR03G31200 Leersia perrieri LPERR03G31200 N 0.747
LPERR08G17300 Leersia perrieri LPERR08G17300 N 0.727
OBART08G20460 Oryza barthii OBART08G20460 N 0.758
OB08G27360 Oryza brachyantha OB08G27360 N 0.737
OGLUM03G36620 Oryza glumaepatula OGLUM03G36620 N 0.747
OGLUM08G21760 Oryza glumaepatula OGLUM08G21760 N 0.758
BGIOSGA029005 Oryza indica BGIOSGA029005 N 0.758
BGIOSGA013705 Oryza indica BGIOSGA013705 N 0.758
OMERI02G02130 Oryza meridionalis OMERI02G02130 N 0.758
ONIVA08G23410 Oryza nivara ONIVA08G23410 N 0.758
OPUNC03G33890 Oryza punctata OPUNC03G33890 N 0.768
OPUNC08G18660 Oryza punctata OPUNC08G18660 N 0.727
ORUFI08G22960 Oryza rufipogon ORUFI08G22960 N 0.758
Pavir.J04242 Panicum virgatum Pavir.J04242 N 0.707
Pavir.J05299 Panicum virgatum Pavir.J05299 N 0.970
Si039129m.g Setaria italica Si039129m.g N 0.848
Sb01g005700 Sorghum bicolor Sb01g005700 N 0.889
Traes_5BL_26B26165E Triticum aestivum Traes_5BL_26B26165E N 0.750
TRIUR3_34186 Triticum urartu TRIUR3_34186 N 0.707
GRMZM2G011385 Zea mays GRMZM2G011385 N 0.869