CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb01g005700
(
Sorghum bicolor
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
Sb01g005700
T245953_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g005700.1
LOB
20
118
RCAACKNQRRKCGHDCVLAPYFPASDPQRYACVQRVFGASNVARMLQNLPVHERARAADTMAMEARRRVQDPVYGCAGIVGRLQGEIRAAQCELARTQA
Links
Other
LOB
family TFs
Other
Sorghum bicolor
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G011385
Zea mays
GRMZM2G011385
N
0.919
Pavir.J09684
Panicum virgatum
Pavir.J09684
N
0.889
Pavir.J05299
Panicum virgatum
Pavir.J05299
N
0.879
Si039129m.g
Setaria italica
Si039129m.g
N
0.838
OPUNC03G33890
Oryza punctata
OPUNC03G33890
N
0.788
BGIOSGA013705
Oryza indica
BGIOSGA013705
N
0.778
LPERR03G31200
Leersia perrieri
LPERR03G31200
N
0.778
Traes_5BL_26B26165E
Triticum aestivum
Traes_5BL_26B26165E
N
0.771
BGIOSGA029005
Oryza indica
BGIOSGA029005
N
0.758
F775_04514
Aegilops tauschii
F775_04514
N
0.758
OBART08G20460
Oryza barthii
OBART08G20460
N
0.758
OGLUM03G36620
Oryza glumaepatula
OGLUM03G36620
N
0.758
OGLUM08G21760
Oryza glumaepatula
OGLUM08G21760
N
0.758
OMERI02G02130
Oryza meridionalis
OMERI02G02130
N
0.758
ONIVA08G23410
Oryza nivara
ONIVA08G23410
N
0.758
ORUFI08G22960
Oryza rufipogon
ORUFI08G22960
N
0.758
TRIUR3_34186
Triticum urartu
TRIUR3_34186
N
0.758
OB08G27360
Oryza brachyantha
OB08G27360
N
0.737
OPUNC08G18660
Oryza punctata
OPUNC08G18660
N
0.737
LPERR08G17300
Leersia perrieri
LPERR08G17300
N
0.727
Pavir.J04242
Panicum virgatum
Pavir.J04242
N
0.727
Si015521m.g
Setaria italica
Si015521m.g
N
0.717
Pavir.Fb01953
Panicum virgatum
Pavir.Fb01953
N
0.717