Pavir.J25219 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J25219 T247246_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J25219.1.p LOB 1 104

Links

Other LOB family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N
ACEP25962 Atta cephalotes ACEP25962 N
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N
ARID2 Bos taurus ENSBTAG00000011087 N
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N
ARID2 Canis familiaris ENSCAFG00000009335 N
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N
CLEC001081 Cimex lectularius CLEC001081 N
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N
ARID2 Equus caballus ENSECAG00000019032 N
ARID2 Felis catus ENSFCAG00000012831 N
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N
HelroG195033 Helobdella robusta HelroG195033 N
ARID2 Homo sapiens ENSG00000189079 N
ISCW014107 Ixodes scapularis ISCW014107 N
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N
ARID2 Loxodonta africana ENSLAFG00000004415 N
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N
ARID2 Macaca mulatta ENSMMUG00000015962 N
ARID2 Microcebus murinus ENSMICG00000001487 N
ARID2 Monodelphis domestica ENSMODG00000018527 N
MDOA004973 Musca domestica MDOA004973 I
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N
ARID2 Myotis lucifugus ENSMLUG00000006908 N
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N
ARID2 Otolemur garnettii ENSOGAG00000024418 N
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N
PHUM060660 Pediculus humanus PHUM060660 N
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N
ARID2 Pteropus vampyrus ENSPVAG00000009834 N
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N
PTSG_01032 Salpingoeca rosetta PTSG_01032 I
SINV17530 Solenopsis invicta SINV17530 N
ARID2 Sorex araneus ENSSARG00000007415 N
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N
Tal_R007164 Tyto alba Tal_R007164 N
ARID2 Vicugna pacos ENSVPAG00000004779 N
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N