GSMUA_Achr9G04510_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr9G04510_001 T249175_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05550
M06978_2.00 		Arabidopsis thaliana
HNDYCGCCGGMRWND
HNWYKCCGGCGRHND		 Dap-seq
OMalley et al.(2016)
AT5G05550_col_a 		0.813 0.642
AT5G05550
M06979_2.00 		Arabidopsis thaliana
HYNYCGCCGGARWHD
HDWYTCCGGCGRNRD		 Dap-seq
OMalley et al.(2016)
AT5G05550_colamp_a 		0.813 0.642
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P04510_001 MADF 34 108

Links

Other MADF family TFs
Other Musa acuminata TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N 0.000
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N 0.000
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N 0.000
Bm1891 Brugia malayi Bm1891 N 0.000
BTMF_0001195401 Brugia timori BTMF_0001195401 N 0.000
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N 0.000
DME_0001005001 Dracunculus medinensis DME_0001005001 N 0.000
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N 0.000
GPLIN_000077900 Globodera pallida GPLIN_000077900 N 0.000
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N 0.000
HCOI00324200 Haemonchus contortus HCOI00324200 N 0.000
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N 0.000
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N 0.000
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N 0.000
NECAME_01002 Necator americanus NECAME_01002 N 0.000
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N 0.000
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N 0.000
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N 0.000
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N 0.000
WBGene00237224 Onchocerca volvulus WBGene00237224 N 0.000
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N 0.000
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N 0.000
PPA05721 Pristionchus pacificus PPA05721 N 0.000
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N 0.000
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N 0.000
TCLT_0000619901 Thelazia callipaeda TCLT_0000619901 N 0.000
TCNE_0000128301 Toxocara canis TCNE_0000128301 N 0.000
D917_06367 Trichinella nativa D917_06367 N 0.000
EFV52694 Trichinella spiralis EFV52694 N 0.000
TMUE_s0224000200 Trichuris muris TMUE_s0224000200 N 0.000
D918_04368 Trichuris suis D918_04368 N 0.000
WUBG_00477 Wuchereria bancrofti WUBG_00477 N 0.000