MLOC_70549 (Hordeum vulgare)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MLOC_70549 T249449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.871 0.698
PK15172.1
M01263_2.00 		Cannabis sativa
NNNGTWAHWN
NWDTWACNNN		 PBM
Lambert et al.(2019)
pTH10125 		0.933 0.714
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.871 0.698
OS02G0104500
M02271_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH8719 		0.835 0.600
OS02G0104500
M02272_2.00 		Oryza sativa
NDGTAAWWHN
NDWWTTACHN		 PBM
Weirauch et al.(2014)
pTH9273 		0.835 0.600
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_70549.1 MADF 301 372
MLOC_70549.1 MADF 676 748
MLOC_70549.2 MADF 301 374
MLOC_70549.2 MADF 579 651
MLOC_70549.3 MADF 72 145

Links

Other MADF family TFs
Other Hordeum vulgare TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000003840 Anas platyrhynchos ENSAPLG00000003840 N 0.000
ZNF512 Anolis carolinensis ENSACAG00000009040 N 0.000
Afo_R007231 Aptenodytes forsteri Afo_R007231 N 0.000
ENSBTAP00000032885-D1 Bos grunniens ENSBTAP00000032885-D1 N 0.000
ZNF512 Bos taurus ENSBTAG00000003902 N 0.000
ZNF512 Callithrix jacchus ENSCJAG00000009180 N 0.000
Aan_R008421 Calypte anna Aan_R008421 N 0.000
ENSCAFG00000014496 Canis familiaris ENSCAFG00000014496 N 0.000
ZNF512 Cavia porcellus ENSCPOG00000004356 N 0.000
ENSCSAG00000010138 Chlorocebus sabaeus ENSCSAG00000010138 N 0.000
Zfp512 Dipodomys ordii ENSDORG00000012164 N 0.000
ZNF512 Equus caballus ENSECAG00000014118 N 0.000
ENSFALG00000011302 Ficedula albicollis ENSFALG00000011302 N 0.000
ZNF512 Gallus gallus ENSGALG00000016506 N 0.000
ZNF512 Gorilla gorilla ENSGGOG00000009586 N 0.000
ZNF512 Homo sapiens ENSG00000243943 N 0.000
ENSSTOG00000006337 Ictidomys tridecemlineatus ENSSTOG00000006337 N 0.000
ENSLOCG00000015845 Lepisosteus oculatus ENSLOCG00000015845 N 0.000
ENSMMUP00000025956 Macaca fascicularis ENSMMUP00000025956 N 0.000
ZNF512 Macaca mulatta ENSMMUG00000019742 N 0.000
ZNF512 Meleagris gallopavo ENSMGAG00000014063 N 0.000
ENSMICG00000017454 Microcebus murinus ENSMICG00000017454 N 0.000
Zfp512 Mus musculus ENSMUSG00000062761 N 0.000
Myotis_brandtii_ZNF512_10031171 Myotis brandtii Myotis_brandtii_ZNF512_10031171 N 0.000
ZNF512 Myotis lucifugus ENSMLUG00000011855 N 0.000
ENSNLEG00000003871 Nomascus leucogenys ENSNLEG00000003871 N 0.000
ZNF512 Ochotona princeps ENSOPRG00000012973 N 0.000
ZNF512 Ornithorhynchus anatinus ENSOANG00000005687 N 0.000
ZNF512 Oryctolagus cuniculus ENSOCUG00000013611 N 0.000
ENSOARG00000019385 Ovis aries ENSOARG00000019385 N 0.000
ZNF512 Pan troglodytes ENSPTRG00000024236 N 0.000
ENSPANG00000000664 Papio anubis ENSPANG00000000664 N 0.000
ENSPSIG00000008225 Pelodiscus sinensis ENSPSIG00000008225 N 0.000
ENSPPYG00000012540 Pongo abelii ENSPPYG00000012540 N 0.000
ZNF512 Sus scrofa ENSSSCG00000008545 N 0.000
ZNF512 Taeniopygia guttata ENSTGUG00000014642 N 0.000
ENSTRUG00000011596 Takifugu rubripes ENSTRUG00000011596 N 0.000
ENSTSYG00000006511 Tarsius syrichta ENSTSYG00000006511 N 0.000
ENSTNIG00000004200 Tetraodon nigroviridis ENSTNIG00000004200 N 0.000
ZNF512 Tursiops truncatus ENSTTRG00000012529 N 0.000
Tal_R000752 Tyto alba Tal_R000752 N 0.000
ZNF512 Vicugna pacos ENSVPAG00000001994 N 0.000