Gorai.007G371500 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.007G371500 T250709_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.949 0.750
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.949 0.750
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.949 0.750
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.943 0.681
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G371500.1 MADF 113 189
Gorai.007G371500.2 MADF 113 189

Links

Other MADF family TFs
Other Gossypium raimondii TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g07980 Acanthocheilonema viteae nAv.1.0.1.g07980 N
ASIM_0001797201 Anisakis simplex ASIM_0001797201 N
ASU_07850 Ascaris suum ASU_07850 N
ASU_10156 Ascaris suum ASU_10156 N
Bm9357 Brugia malayi Bm9357 N
nDi.2.2.2.g10211 Dirofilaria immitis nDi.2.2.2.g10211 N
DME_0000394001 Dracunculus medinensis DME_0000394001 N
EVEC_0000016901 Enterobius vermicularis EVEC_0000016901 N
GPUH_0001412301 Gongylonema pulchrum GPUH_0001412301 N
nLs.2.1.2.g09588 Litomosoides sigmodontis nLs.2.1.2.g09588 N
OFLC_0001521701 Onchocerca flexuosa OFLC_0001521701 N
nOo.2.0.1.g08345 Onchocerca ochengi nOo.2.0.1.g08345 N
WBGene00244696 Onchocerca volvulus WBGene00244696 N
TCLT_0000203401 Thelazia callipaeda TCLT_0000203401 N
WUBG_11490 Wuchereria bancrofti WUBG_11490 N