CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001412301
(
Gongylonema pulchrum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPUH_0001412301
T029351_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001412301-mRNA-1
BED ZF
24
66
SNVWNHFLRLCDGNVQCVHCGKILKRKDSSTKTMWGHLRAIHF
Links
Other
BED ZF
family TFs
Other
Gongylonema pulchrum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WBGene00244696
Onchocerca volvulus
WBGene00244696
N
0.929
nOo.2.0.1.g08345
Onchocerca ochengi
nOo.2.0.1.g08345
N
0.929
OFLC_0001521701
Onchocerca flexuosa
OFLC_0001521701
N
0.929
nDi.2.2.2.g10211
Dirofilaria immitis
nDi.2.2.2.g10211
N
0.905
ASIM_0001797201
Anisakis simplex
ASIM_0001797201
N
0.881
ASU_07850
Ascaris suum
ASU_07850
N
0.881
ASU_10156
Ascaris suum
ASU_10156
N
0.881
DME_0000394001
Dracunculus medinensis
DME_0000394001
N
0.881
WUBG_11490
Wuchereria bancrofti
WUBG_11490
N
0.857
Bm9357
Brugia malayi
Bm9357
N
0.857
nAv.1.0.1.g07980
Acanthocheilonema viteae
nAv.1.0.1.g07980
N
0.857
TCLT_0000203401
Thelazia callipaeda
TCLT_0000203401
N
0.857
LOAG_16689
Loa loa
LOAG_16689
N
0.833
EVEC_0000016901
Enterobius vermicularis
EVEC_0000016901
N
0.833
nLs.2.1.2.g09588
Litomosoides sigmodontis
nLs.2.1.2.g09588
N
0.833