CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA000269
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA000269
T252963_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA000269-PA
MADS box
10
58
LIANPQTRATTYKKRKAGLIKKAGELATLCDIPVAVVCAGPDGGAPTVW
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G41560
Oryza barthii
OBART01G41560
N
1.000
OB01G50150
Oryza brachyantha
OB01G50150
N
0.708
ORGLA01G0355000
Oryza glaberrima
ORGLA01G0355000
N
1.000
OGLUM01G45730
Oryza glumaepatula
OGLUM01G45730
N
0.979
OLONG_001193
Oryza longistaminata
OLONG_001193
N
1.000
OMERI01G38510
Oryza meridionalis
OMERI01G38510
N
1.000
ONIVA01G46660
Oryza nivara
ONIVA01G46660
N
1.000
OPUNC01G40380
Oryza punctata
OPUNC01G40380
N
0.958
ORUFI01G44910
Oryza rufipogon
ORUFI01G44910
N
1.000