CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g003660
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo7g003660
T253157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g003660.1
MADS box
10
55
KIENVNSRHVTFSKSSNGLIKKANELSFLCEVDVIVFSSTVKVYYF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB07644.1
Alternaria brassicicola
AB07644.1
N
0.000
fgenesh1_pg.00609_#_575
Aspergillus carbonarius
fgenesh1_pg.00609_#_575
N
0.000
ACLA_045490
Aspergillus clavatus
CADACLAG00004978
N
0.000
CADAFLAG00005113
Aspergillus flavus
CADAFLAG00005113
N
0.000
AFUA_4G06170
Aspergillus fumigatus
CADAFUAG00008511
N
0.000
ANIA_04324
Aspergillus nidulans
CADANIAG00006139
N
0.000
CADANGAG00003756
Aspergillus niger
CADANGAG00003756
N
0.000
CADAORAG00008051
Aspergillus oryzae
CADAORAG00008051
N
0.000
EURHEDRAFT_516818
Aspergillus ruber
EURHEDRAFT_516818
N
0.000
M437DRAFT_51114
Aureobasidium melanogenum
M437DRAFT_51114
N
0.000
M438DRAFT_40073
Aureobasidium pullulans
M438DRAFT_40073
N
0.000
AUEXF2481DRAFT_168419
Aureobasidium subglaciale
AUEXF2481DRAFT_168419
N
0.000
BAUCODRAFT_118710
Baudoinia compniacensis
BAUCODRAFT_118710
N
0.000
COCC4DRAFT_129366
Bipolaris maydis
COCC4DRAFT_129366
N
0.000
COCMIDRAFT_26299
Bipolaris oryzae
COCMIDRAFT_26299
N
0.000
COCSADRAFT_39300
Bipolaris sorokiniana
COCSADRAFT_39300
N
0.000
COCVIDRAFT_18953
Bipolaris victoriae
COCVIDRAFT_18953
N
0.000
COCCADRAFT_28724
Bipolaris zeicola
COCCADRAFT_28724
N
0.000
BDDG_08069
Blastomyces dermatitidis
BDDG_08069
N
0.000
PVAR5_4132
Byssochlamys spectabilis
PVAR5_4132
N
0.000
A1O1_06448
Capronia coronata
A1O1_06448
N
0.000
A1O3_05959
Capronia epimyces
A1O3_05959
N
0.000
PV04_06890
Capronia semiimmersa
PV04_06890
N
0.000
Z519_03993
Cladophialophora bantiana
Z519_03993
N
0.000
G647_06053
Cladophialophora carrionii
G647_06053
N
0.000
PV07_12548
Cladophialophora immunda
PV07_12548
N
0.000
PV07_03724
Cladophialophora immunda
PV07_03724
N
0.000
A1O5_08664
Cladophialophora psammophila
A1O5_08664
N
0.000
A1O7_06479
Cladophialophora yegresii
A1O7_06479
N
0.000
estExt_fgenesh1_kg.C_60062
Cochliobolus heterostrophus C5
estExt_fgenesh1_kg.C_60062
N
0.000
CSUB01_08232
Colletotrichum sublineola
CSUB01_08232
N
0.000
W97_00412
Coniosporium apollinis
W97_00412
N
0.000
DOTSEDRAFT_68488
Dothistroma septosporum
DOTSEDRAFT_68488
N
0.000
A1O9_08053
Exophiala aquamarina
A1O9_08053
N
0.000
HMPREF1120_03961
Exophiala dermatitidis
HMPREF1120_03961
N
0.000
PV10_08689
Exophiala mesophila
PV10_08689
N
0.000
PV06_02579
Exophiala oligosperma
PV06_02579
N
0.000
PV11_06703
Exophiala sideris
PV11_06703
N
0.000
PV08_11376
Exophiala spinifera
PV08_11376
N
0.000
PV05_09061
Exophiala xenobiotica
PV05_09061
N
0.000
Z517_00960
Fonsecaea pedrosoi
Z517_00960
N
0.000
HCBG_02231
Histoplasma capsulatum
HCBG_02231
N
0.000
LEMA_P055360.1
Leptosphaeria maculans
LEMA_P055360.1
N
0.000
MPH_03233
Macrophomina phaseolina
MPH_03233
N
0.000
MBM_05804
Marssonina brunnea
MBM_05804
N
0.000
fgenesh1_pg.C_scaffold_1000709
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1000709
N
0.000
estExt_fgenesh1_pg.C_chr_11225
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_11225
N
0.000
NFIA_109970
Neosartorya fischeri
CADNFIAG00009928
N
0.000
PABG_04201
Paracoccidioides brasiliensis
PABG_04201
N
0.000
PAAG_04399
Paracoccidioides sp lutzii
PAAG_04399
N
0.000
PMAA_027450
Penicillium marneffei
PMAA_027450
N
0.000
GMDG_03916
Pseudogymnoascus destructans
GMDG_03916
N
0.000
PTT_04046
Pyrenophora teres
PTT_04046
N
0.000
PTRG_00938
Pyrenophora triticirepentis
PTRG_00938
N
0.000
Z518_02769
Rhinocladiella mackenziei
Z518_02769
N
0.000
SETTUDRAFT_98045
Setosphaeria turcica
SETTUDRAFT_98045
N
0.000
SEPMUDRAFT_145925
Sphaerulina musiva
SEPMUDRAFT_145925
N
0.000
PMAA_027450
Talaromyces marneffei
PMAA_027450
N
0.000
PV09_02366
Verruconis gallopava
PV09_02366
N
0.000
Mycgr3G107497
Zymoseptoria tritici
Mycgr3G107497
N
0.000