CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo7g003660
(
Brassica oleracea
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bo7g003660
T253157_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g003660.1
MADS box
10
55
KIENVNSRHVTFSKSSNGLIKKANELSFLCEVDVIVFSSTVKVYYF
Links
Other
MADS box
family TFs
Other
Brassica oleracea
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo7g003640
Brassica oleracea
Bo7g003640
N
0.913
Bra005545
Brassica rapa
Bra005545
N
0.891
Bra040348
Brassica rapa
Bra040348
N
0.870
Bra014628
Brassica rapa
Bra014628
I
0.761
Bo4g111230
Brassica oleracea
Bo4g111230
I
0.739
Bo6g072840
Brassica oleracea
Bo6g072840
I
0.739
Bra003278
Brassica rapa
Bra003278
I
0.739
Cagra.0578s0070
Capsella grandiflora
Cagra.0578s0070
I
0.739
Carubv10017886m.g
Capsella rubella
Carubv10017886m.g
I
0.739
Ciclev10005698m.g
Citrus clementina
Ciclev10005698m.g
I
0.739
orange1.1g039982m.g
Citrus sinensis
orange1.1g039982m.g
I
0.739
AGL18
Arabidopsis thaliana
AT3G57390
I
0.717
Bo8g091790
Brassica oleracea
Bo8g091790
I
0.717
Bra007324
Brassica rapa
Bra007324
I
0.717
TCM_024579
Theobroma cacao
TCM_024579
I
0.717
Bostr.20505s0007
Boechera stricta
Bostr.20505s0007
I
0.717