GRMZM2G005155 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G005155 T254265_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.750 0.750
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.708 0.708
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.708 0.708
AGL42
M06995_2.00 		Arabidopsis thaliana
RATGATG
CATCATY		 Dap-seq
OMalley et al.(2016)
AGL42_col_a 		0.708 0.708
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G005155_P01 MADS box 10 57
GRMZM2G005155_P02 MADS box 10 57
GRMZM2G005155_P03 MADS box 10 57

Links

Other MADS box family TFs
Other Zea mays TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05654 Aegilops tauschii F775_05654 I 0.875
F775_15097 Aegilops tauschii F775_15097 I 0.750
F775_18161 Aegilops tauschii F775_18161 I 0.708
F775_30836 Aegilops tauschii F775_30836 I 0.771
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.729
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.750
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.729
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.729
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.729
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.729
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.708
AGL16 Arabidopsis thaliana AT3G57230 D 0.708
AGL72 Arabidopsis thaliana AT5G51860 I 0.708
AGL71 Arabidopsis thaliana AT5G51870 I 0.729
AGL42 Arabidopsis thaliana AT5G62165 D 0.708
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.729
Bostr.20505s0022 Boechera stricta Bostr.20505s0022 I 0.708
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.729
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.771
BRADI3G46920 Brachypodium distachyon BRADI3G46920 I 0.708
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.896
Bo1g007520 Brassica oleracea Bo1g007520 I 0.729
Bo3g023570 Brassica oleracea Bo3g023570 I 0.708
Bo7g116760 Brassica oleracea Bo7g116760 I 0.708
Bo9g103660 Brassica oleracea Bo9g103660 I 0.708
Bra011509 Brassica rapa Bra011509 I 0.729
Bra017638 Brassica rapa Bra017638 I 0.708
Bra028282 Brassica rapa Bra028282 I 0.708
Bra028283 Brassica rapa Bra028283 I 0.708
Bra029154 Brassica rapa Bra029154 I 0.708
Bra029155 Brassica rapa Bra029155 I 0.708
PK01421.1 Cannabis sativa PK01421.1 I 0.708
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.729
Cagra.0578s0054 Capsella grandiflora Cagra.0578s0054 I 0.708
Cagra.4003s0006 Capsella grandiflora Cagra.4003s0006 I 0.708
Carubv10017951m.g Capsella rubella Carubv10017951m.g I 0.708
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.750
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.729
Carubv10027142m.g Capsella rubella Carubv10027142m.g I 0.708
Ca_19854 Cicer arietinum Ca_19854 I 0.708
Cla023427 Citrullus lanatus Cla023427 I 0.708
Thhalv10004954m.g Eutrema salsugineum Thhalv10004954m.g I 0.708
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.708
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.729
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.708
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.708
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I 0.708
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.708
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.708
GLYMA13G02170 Glycine max GLYMA13G02170 I 0.708
GLYMA14G34160 Glycine max GLYMA14G34160 I 0.708
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.708
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.875
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.771
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.750
LPERR02G17700 Leersia perrieri LPERR02G17700 I 0.708
LPERR04G11770 Leersia perrieri LPERR04G11770 I 0.708
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.938
Lus10027404.g Linum usitatissimum Lus10027404.g I 0.708
Lus10031665.g Linum usitatissimum Lus10031665.g I 0.708
LjSGA_019451.1 Lotus japonicus LjSGA_019451.1 I 0.708
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I 0.708
MDP0000268317 Malus domestica MDP0000268317 I 0.708
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
mgf023192m Mimulus guttatus mgf023192m I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.729
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.854
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.812
GSMUA_Achr7G02960_001 Musa acuminata GSMUA_Achr7G02960_001 I 0.702
OBART02G05380 Oryza barthii OBART02G05380 I 0.750
OBART02G21870 Oryza barthii OBART02G21870 I 0.708
OBART04G15020 Oryza barthii OBART04G15020 I 0.708
OBART04G25610 Oryza barthii OBART04G25610 I 0.917
OBART06G14060 Oryza barthii OBART06G14060 I 0.750
OB01G48510 Oryza brachyantha OB01G48510 I 0.708
OB02G14670 Oryza brachyantha OB02G14670 I 0.750
OB02G29310 Oryza brachyantha OB02G29310 I 0.708
OB04G21020 Oryza brachyantha OB04G21020 I 0.702
OB04G22330 Oryza brachyantha OB04G22330 I 0.708
OB04G32080 Oryza brachyantha OB04G32080 I 0.917
OB06G22200 Oryza brachyantha OB06G22200 I 0.729
OB11G21480 Oryza brachyantha OB11G21480 I 0.714
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.750
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I 0.708
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.917
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.750
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.750
OGLUM02G22050 Oryza glumaepatula OGLUM02G22050 I 0.708
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.917
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.750
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.750
BGIOSGA008494 Oryza indica BGIOSGA008494 I 0.708
BGIOSGA015021 Oryza indica BGIOSGA015021 I 0.702
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.917
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.750
OLONG_016283 Oryza longistaminata OLONG_016283 I 0.708
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.750
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.896
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.737
OLONG_024179 Oryza longistaminata OLONG_024179 I 0.708
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.750
OMERI02G21410 Oryza meridionalis OMERI02G21410 I 0.708
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.917
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.750
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.750
ONIVA02G24100 Oryza nivara ONIVA02G24100 I 0.708
ONIVA04G13150 Oryza nivara ONIVA04G13150 I 0.708
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.750
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.750
OPUNC02G19600 Oryza punctata OPUNC02G19600 I 0.708
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.729
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.917
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.750
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.750
ORUFI02G22950 Oryza rufipogon ORUFI02G22950 I 0.708
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I 0.708
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.917
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.750
MADS29 Oryza sativa OS02G0170300 I 0.750
MADS27 Oryza sativa OS02G0579600 I 0.708
OS04G0461300 Oryza sativa OS04G0461300 I 0.708
MADS31 Oryza sativa OS04G0614100 I 0.917
OS06G0347700 Oryza sativa OS06G0347700 I 0.750
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.750
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.750
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.771
Pavir.Ea03607 Panicum virgatum Pavir.Ea03607 I 0.708
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 1.000
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.708
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.979
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.708
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.729
Pm019404 Prunus mume Pm019404 I 0.708
PRUPE_ppa019267mg Prunus persica PRUPE_ppa019267mg I 0.708
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.708
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.708
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.708
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.708
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.708
Si003917m.g Setaria italica Si003917m.g I 0.708
Si012517m.g Setaria italica Si012517m.g I 0.708
Si018183m.g Setaria italica Si018183m.g I 0.750
Si019337m.g Setaria italica Si019337m.g I 0.708
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.708
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.729
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.729
PGSC0003DMG400023729 Solanum tuberosum PGSC0003DMG400023729 I 0.708
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.750
Sb04g024010 Sorghum bicolor Sb04g024010 I 0.708
Sb06g028420 Sorghum bicolor Sb06g028420 I 1.000
Traes_1DS_A0312C264 Triticum aestivum Traes_1DS_A0312C264 I 0.708
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.875
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.875
Traes_4AL_72A03AD23 Triticum aestivum Traes_4AL_72A03AD23 I 0.708
Traes_5DS_82FA431DB Triticum aestivum Traes_5DS_82FA431DB I 0.708
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.771
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.771
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.771
Traes_7BL_F5B6736D0 Triticum aestivum Traes_7BL_F5B6736D0 I 0.729
TRIUR3_09266 Triticum urartu TRIUR3_09266 I 0.708
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.875
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.771
TT16 Vitis vinifera VIT_01s0011g01560 I 0.750
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.729
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.708
AC233912.1_FG001 Zea mays AC233912.1_FG001 I 0.979
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.708
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.729
GRMZM2G128953 Zea mays GRMZM2G128953 I 0.979
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.729
GRMZM2G135018 Zea mays GRMZM2G135018 I 1.000
GRMZM2G137387 Zea mays GRMZM2G137387 I 0.938
GRMZM2G148220 Zea mays GRMZM2G148220 N 0.917
GRMZM2G316366 Zea mays GRMZM2G316366 I 0.708
GRMZM2G446426 Zea mays GRMZM2G446426 N 0.938
M17_MAIZE Zea mays M17_MAIZE D 0.750
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D 0.708