HCBG_00204 (Histoplasma capsulatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 HCBG_00204 T254444_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.750 0.750
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEH10749 MADS box 10 57

Links

Other MADS box family TFs
Other Histoplasma capsulatum TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA04G37020 Glycine max GLYMA04G37020 N 0.000
GLYMA17G13780 Glycine max GLYMA17G13780 N 0.000
Gorai.003G119600 Gossypium raimondii Gorai.003G119600 N 0.000
ORUFI02G20630 Oryza rufipogon ORUFI02G20630 N 0.000
Pavir.Ab01874 Panicum virgatum Pavir.Ab01874 N 0.000
POPTR_0015s10570 Populus trichocarpa POPTR_0015s10570 N 0.000
PGSC0003DMG401015244 Solanum tuberosum PGSC0003DMG401015244 N 0.000
Sb04g005900 Sorghum bicolor Sb04g005900 N 0.000