CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC12G08610
(
Oryza punctata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OPUNC12G08610
T255352_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC12G08610.1
MADS box
18
65
LIDTNDRRRVTFAKRRCGLFKKVAELALLIGASIAVVVFSETNRAYAF
Links
Other
MADS box
family TFs
Other
Oryza punctata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART12G09480
Oryza barthii
OBART12G09480
N
0.771
ORGLA12G0089800
Oryza glaberrima
ORGLA12G0089800
N
0.771
OGLUM12G10670
Oryza glumaepatula
OGLUM12G10670
N
0.771
BGIOSGA036334
Oryza indica
BGIOSGA036334
N
0.708
OLONG_012662
Oryza longistaminata
OLONG_012662
N
0.708
ONIVA12G01620
Oryza nivara
ONIVA12G01620
N
0.771
OPUNC12G08600
Oryza punctata
OPUNC12G08600
N
0.708
ORUFI12G10530
Oryza rufipogon
ORUFI12G10530
N
0.771