PGSC0003DMG400036160 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400036160 T255671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400086589 MADS box 3 50

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26965 Aegilops tauschii F775_26965 I 0.000
PK25119.1 Cannabis sativa PK25119.1 I 0.000
Ca_18090 Cicer arietinum Ca_18090 I 0.000
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.000
MLOC_4747 Hordeum vulgare MLOC_4747 I 0.000
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.000
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.000
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.000
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.000
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.000
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I 0.000
MDP0000481448 Malus domestica MDP0000481448 I 0.000
MTR_5g041940 Medicago truncatula MTR_5g041940 I 0.000
mgf022118m Mimulus guttatus mgf022118m I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.000
OBART11G01590 Oryza barthii OBART11G01590 I 0.000
OBART12G01290 Oryza barthii OBART12G01290 I 0.000
OB11G11210 Oryza brachyantha OB11G11210 I 0.000
OB12G11500 Oryza brachyantha OB12G11500 I 0.000
ORGLA12G0011400 Oryza glaberrima ORGLA12G0011400 I 0.000
OGLUM11G01310 Oryza glumaepatula OGLUM11G01310 I 0.000
OGLUM12G01870 Oryza glumaepatula OGLUM12G01870 I 0.000
BGIOSGA036918 Oryza indica BGIOSGA036918 I 0.000
BGIOSGA034713 Oryza indica BGIOSGA034713 I 0.000
OLONG_020632 Oryza longistaminata OLONG_020632 I 0.000
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.000
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.000
ONIVA11G01630 Oryza nivara ONIVA11G01630 I 0.000
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.000
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.000
ORUFI12G01570 Oryza rufipogon ORUFI12G01570 I 0.000
OS11G0126900 Oryza sativa OS11G0126900 I 0.000
OS12G0123700 Oryza sativa OS12G0123700 I 0.000
Pavir.J23516 Panicum virgatum Pavir.J23516 I 0.000
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.000
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.000
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.000
e_gw1.15.275.1 Physcomitrella patens e_gw1.15.275.1 I 0.000
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.000
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.000
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.000
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.000
Si026530m.g Setaria italica Si026530m.g I 0.000
Si030267m.g Setaria italica Si030267m.g I 0.000
Si010410m.g Setaria italica Si010410m.g I 0.000
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.000
Sb08g001940 Sorghum bicolor Sb08g001940 I 0.000
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D 0.000
GRMZM2G312201 Zea mays GRMZM2G312201 N 0.000
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.000
GRMZM2G127379 Zea mays GRMZM2G127379 I 0.000
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.000