VIT_14s0060g00300 (Vitis vinifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 VIT_14s0060g00300 T256795_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_14s0060g00300.t01 MADS box 10 58

Links

Other MADS box family TFs
Other Vitis vinifera TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g02876 Acanthocheilonema viteae nAv.1.0.1.g02876 N
ANCDUO_19967 Ancylostoma duodenale ANCDUO_19967 N
ASIM_0001677501 Anisakis simplex ASIM_0001677501 N
Bm3899 Brugia malayi Bm3899 N
CBN06012 Caenorhabditis brenneri CBN06012 N
CBN00758 Caenorhabditis brenneri CBN00758 N
CBG02231 Caenorhabditis briggsae CBG02231 N
tag-68 Caenorhabditis elegans WBGene00006445 N
CJA12147 Caenorhabditis japonica CJA12147 N
CRE29609 Caenorhabditis remanei CRE29609 N
DICVIV_00304 Dictyocaulus viviparus DICVIV_00304 N
nDi.2.2.2.g08539 Dirofilaria immitis nDi.2.2.2.g08539 N
EVEC_0000982901 Enterobius vermicularis EVEC_0000982901 N
HCOI01584000 Haemonchus contortus HCOI01584000 N
HPLM_0000720101 Haemonchus placei HPLM_0000720101 N
nLs.2.1.2.g02844 Litomosoides sigmodontis nLs.2.1.2.g02844 N
LOAG_18157 Loa loa LOAG_18157 N
MhA1_Contig659.frz3.gene12 Meloidogyne hapla MhA1_Contig659.frz3.gene12 N
Minc00757 Meloidogyne incognita Minc00757 N
NECAME_05919 Necator americanus NECAME_05919 N
PTRK_0001052400 Parastrongyloides trichosuri PTRK_0001052400 N
RSKR_0000114000 Rhabditophanes kr3021 RSKR_0000114000 N
L596_g21063 Steinernema carpocapsae L596_g21063 N
L889_g15246 Steinernema feltiae L889_g15246 N
L893_g5132 Steinernema glaseri L893_g5132 N
L898_g4344 Steinernema monticolum L898_g4344 N
SPAL_0000096300 Strongyloides papillosus SPAL_0000096300 N
SSTP_0000137400 Strongyloides stercoralis SSTP_0000137400 N
TELCIR_17986 Teladorsagia circumcincta TELCIR_17986 N
TELCIR_20778 Teladorsagia circumcincta TELCIR_20778 N
TCLT_0000822701 Thelazia callipaeda TCLT_0000822701 N
TCNE_0001786701 Toxocara canis TCNE_0001786701 N
WUBG_00492 Wuchereria bancrofti WUBG_00492 N