Eucgr.E01734 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.E01734 T257948_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01734.1 MADS box 10 56

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL015467 Aedes aegypti AAEL015467 I
AAEL005077 Aedes aegypti AAEL005077 I
AALB004378 Anopheles albimanus AALB004378 I
AARA011439 Anopheles arabiensis AARA011439 I
ACHR007994 Anopheles christyi ACHR007994 I
ACOM027831 Anopheles coluzzii ACOM027831 I
ACUA024394 Anopheles culicifacies ACUA024394 I
ADAC005491 Anopheles darlingi ADAC005491 I
ADIR009095 Anopheles dirus ADIR009095 I
AEPI006937 Anopheles epiroticus AEPI006937 I
AFAF013318 Anopheles farauti AFAF013318 I
AFUN007089 Anopheles funestus AFUN007089 I
AGAP005300 Anopheles gambiae AGAP005300 I
AMAM004080 Anopheles maculatus AMAM004080 I
AMEC019428 Anopheles melas AMEC019428 I
AMEM005044 Anopheles merus AMEM005044 I
AMIN010749 Anopheles minimus AMIN010749 I
AQUA000302 Anopheles quadriannulatus AQUA000302 I
ASTEI10188 Anopheles stephensi ASTEI10188 I
GB42329 Apis mellifera GB42329 I
ENSAMXG00000007122 Astyanax mexicanus ENSAMXG00000007122 I
ACEP22936 Atta cephalotes ACEP22936 I
Cflo_00069--XP_001120971.1_APIME Camponotus floridanus Cflo_00069--XP_001120971.1_APIME I
CapteG19335 Capitella teleta CapteG19335 I
CLEC011277 Cimex lectularius CLEC011277 I
nfe2l2b Danio rerio ENSDARG00000089697 I
DAPPUDRAFT_307821 Daphnia pulex DAPPUDRAFT_307821 I
NFE2L3 Equus caballus ENSECAG00000021973 I
ENSFALG00000003227 Ficedula albicollis ENSFALG00000003227 I
ENSGMOG00000004196 Gadus morhua ENSGMOG00000004196 I
nfe2l2a Gasterosteus aculeatus ENSGACG00000004470 I
Gfo_R001386 Geospiza fortis Gfo_R001386 I
ENSLACG00000013393 Latimeria chalumnae ENSLACG00000013393 I
ENSLOCG00000006972 Lepisosteus oculatus ENSLOCG00000006972 I
NV16962 Nasonia vitripennis NV16962 I
NEMVEDRAFT_v1g127893 Nematostella vectensis NEMVEDRAFT_v1g127893 N
Ocbimv22001599m.g Octopus bimaculoides Ocbimv22001599m.g I
ENSONIG00000008604 Oreochromis niloticus ENSONIG00000008604 I
nfe2l2a Oryzias latipes ENSORLG00000017568 I
PHUM512570 Pediculus humanus PHUM512570 I
ENSPFOG00000014090 Poecilia formosa ENSPFOG00000014090 I
ENSPFOG00000008177 Poecilia formosa ENSPFOG00000008177 I
Sakowv30004446m.g Saccoglossus kowalevskii Sakowv30004446m.g I
SINV19778 Solenopsis invicta SINV19778 I
SPU_011174 Strongylocentrotus purpuratus SPU_011174 N
SPU_008752 Strongylocentrotus purpuratus SPU_008752 N
nfe2l2a Takifugu rubripes ENSTRUG00000017486 I
nfe2l1a Takifugu rubripes ENSTRUG00000010088 I
nfe2l2a Tetraodon nigroviridis ENSTNIG00000016959 I
nfe2l1a Tetraodon nigroviridis ENSTNIG00000003150 I
nfe2l2.S Xenopus laevis XB-GENE-943932 I
nfe2.S Xenopus laevis XB-GENE-865028 I
nfe2l2.L Xenopus laevis XB-GENE-17346208 I
nfe2l2 Xenopus tropicalis XB-GENE-943926 I
nfe2 Xenopus tropicalis XB-GENE-483914 I
ENSXMAG00000003544 Xiphophorus maculatus ENSXMAG00000003544 I
ENSXMAG00000000450 Xiphophorus maculatus ENSXMAG00000000450 I
L798_05755 Zootermopsis nevadensis L798_05755 I