CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10012062
Chelonia mydas
Cmyd_10012062
N
Cmyd_10018053
Chelonia mydas
Cmyd_10018053
N
Cmyd_10017755
Chelonia mydas
Cmyd_10017755
N
Cmyd_10017127
Chelonia mydas
Cmyd_10017127
N
Cmyd_10016112
Chelonia mydas
Cmyd_10016112
N
Cmyd_10016076
Chelonia mydas
Cmyd_10016076
N
Cmyd_10015203
Chelonia mydas
Cmyd_10015203
N
Cmyd_10015037
Chelonia mydas
Cmyd_10015037
N
Cmyd_10013937
Chelonia mydas
Cmyd_10013937
N
Cmyd_10013772
Chelonia mydas
Cmyd_10013772
N
Cmyd_10012986
Chelonia mydas
Cmyd_10012986
N
Cmyd_10012830
Chelonia mydas
Cmyd_10012830
N
Cmyd_10012804
Chelonia mydas
Cmyd_10012804
N
Cmyd_10012695
Chelonia mydas
Cmyd_10012695
N
Cmyd_10001489
Chelonia mydas
Cmyd_10001489
N
Cmyd_10012049
Chelonia mydas
Cmyd_10012049
N
Cmyd_10011918
Chelonia mydas
Cmyd_10011918
N
Cmyd_10011123
Chelonia mydas
Cmyd_10011123
N
Cmyd_10009391
Chelonia mydas
Cmyd_10009391
N
Cmyd_10009304
Chelonia mydas
Cmyd_10009304
N
Cmyd_10008690
Chelonia mydas
Cmyd_10008690
N
Cmyd_10007297
Chelonia mydas
Cmyd_10007297
N
Cmyd_10007273
Chelonia mydas
Cmyd_10007273
N
Cmyd_10007153
Chelonia mydas
Cmyd_10007153
N
Cmyd_10006724
Chelonia mydas
Cmyd_10006724
N
Cmyd_10006400
Chelonia mydas
Cmyd_10006400
N
Cmyd_10004478
Chelonia mydas
Cmyd_10004478
N
Cmyd_10004410
Chelonia mydas
Cmyd_10004410
N