CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_02601
Arthroderma benhamiae
ARB_02601
N
MCYG_01409
Arthroderma otae
MCYG_01409
N
fgenesh1_pm.00083_#_828
Aspergillus carbonarius
fgenesh1_pm.00083_#_828
N
CADAFLAG00001664
Aspergillus flavus
CADAFLAG00001664
N
ANIA_01402
Aspergillus nidulans
CADANIAG00001203
N
EURHEDRAFT_443927
Aspergillus ruber
EURHEDRAFT_443927
N
BDDG_08272
Blastomyces dermatitidis
BDDG_08272
N
PVAR5_6661
Byssochlamys spectabilis
PVAR5_6661
N
CIMG_07219
Coccidioides immitis
CIMG_07219
N
CPC735_035380
Coccidioides posadasii
CPC735_035380
N
CGGC5_9554
Colletotrichum gloeosporioides
CGGC5_9554
N
Cob_10954
Colletotrichum orbiculare
Cob_10954
N
W97_02133
Coniosporium apollinis
W97_02133
N
EPUS_04591
Endocarpon pusillum
EPUS_04591
N
MBM_05037
Marssonina brunnea
MBM_05037
N
MCYG_01409
Microsporum canis
MCYG_01409
N
MGYG_01953
Microsporum gypseum
MGYG_01953
N
NFIA_016950
Neosartorya fischeri
CADNFIAG00001487
N
PABG_06594
Paracoccidioides brasiliensis
PABG_06594
N
PAAG_11083
Paracoccidioides sp lutzii
PAAG_11083
N
PEX1_039750
Penicillium expansum
PEX1_039750
N
PITC_099380
Penicillium italicum
PITC_099380
N
PMAA_046250
Penicillium marneffei
PMAA_046250
I
PDE_06843
Penicillium oxalicum
PDE_06843
N
PCH_Pc16g01710
Penicillium rubens
PCH_Pc16g01710
N
U727_00431841361
Penicillium solitum
U727_00431841361
N
GMDG_02644
Pseudogymnoascus destructans
GMDG_02644
N
V499_03251
Pseudogymnoascus pannorum
V499_03251
N
Z518_10257
Rhinocladiella mackenziei
Z518_10257
N
SAPIO_CDS10703
Scedosporium apiospermum
SAPIO_CDS10703
N
SBOR_8201
Sclerotinia borealis
SBOR_8201
N
PMAA_046250
Talaromyces marneffei
PMAA_046250
I
TSTA_035500
Talaromyces stipitatus
TSTA_035500
I
TEQG_07198
Trichophyton equinum
TEQG_07198
N
H101_07696
Trichophyton interdigitale
H101_07696
N
TESG_06051
Trichophyton tonsurans
TESG_06051
N
TRV_05768
Trichophyton verrucosum
TRV_05768
N
UREG_05691
Uncinocarpus reesii
UREG_05691
N