evm.TU.supercontig_43.109 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_43.109 T258250_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_43.109 MADS box 12 62

Links

Other MADS box family TFs
Other Carica papaya TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACYPI002601 Acyrthosiphon pisum ACYPI002601 I
ENSAMEG00000005942 Ailuropoda melanoleuca ENSAMEG00000005942 I
ENSAMEG00000015953 Ailuropoda melanoleuca ENSAMEG00000015953 I
Alligator_sinensis_CCG001917.1 Alligator sinensis Alligator_sinensis_CCG001917.1 I
ENSAPLG00000008024 Anas platyrhynchos ENSAPLG00000008024 I
TCF21 Anolis carolinensis ENSACAG00000010325 I
MSC Anolis carolinensis ENSACAG00000014585 I
Afo_R014913 Aptenodytes forsteri Afo_R014913 I
ENSAMXG00000000487 Astyanax mexicanus ENSAMXG00000000487 I
BGLB011346 Biomphalaria glabrata BGLB011346 I
ENSBTAP00000044112-D1 Bos grunniens ENSBTAP00000044112-D1 I
ENSBTAP00000052463-D1 Bos grunniens ENSBTAP00000052463-D1 I
MSC Bos taurus ENSBTAG00000005404 I
TCF21 Bos taurus ENSBTAG00000021827 I
fgenesh2_pg.scaffold_201000028 Branchiostoma floridae fgenesh2_pg.scaffold_201000028 I
gw.912.11.1 Branchiostoma floridae gw.912.11.1 I
Brh_R005605 Buceros rhinoceros Brh_R005605 I
TCF21 Callithrix jacchus ENSCJAG00000002811 I
MSC Callithrix jacchus ENSCJAG00000007766 I
Aan_R009769 Calypte anna Aan_R009769 I
Cflo_04912--XP_001121050.1_APIME Camponotus floridanus Cflo_04912--XP_001121050.1_APIME I
TCF21 Canis familiaris ENSCAFG00000000205 I
MSC Canis familiaris ENSCAFG00000007923 I
CapteG80741 Capitella teleta CapteG80741 I
ENSCPOG00000004726 Cavia porcellus ENSCPOG00000004726 I
TCF21 Cavia porcellus ENSCPOG00000024201 I
ENSCSAG00000013709 Chlorocebus sabaeus ENSCSAG00000013709 I
ENSCSAG00000016705 Chlorocebus sabaeus ENSCSAG00000016705 I
CLEC012607 Cimex lectularius CLEC012607 I
CGI_10026944 Crassostrea gigas CGI_10026944 I
tcf21 Danio rerio ENSDARG00000036869 I
msc Danio rerio ENSDARG00000045353 I
DAPPUDRAFT_37461 Daphnia pulex DAPPUDRAFT_37461 I
MSC Dasypus novemcinctus ENSDNOG00000019019 I
TCF21 Dasypus novemcinctus ENSDNOG00000042846 I
ECANG7_04949 Echinococcus canadensis ECANG7_04949 I
EmuJ_000624300 Echinococcus multilocularis EmuJ_000624300 I
TCF21 Echinops telfairi ENSETEG00000012492 I
MSC Equus caballus ENSECAG00000008333 I
TCF21 Equus caballus ENSECAG00000019197 I
MSC Erinaceus europaeus ENSEEUG00000005021 I
TCF21 Felis catus ENSFCAG00000031261 I
ENSFALG00000008455 Ficedula albicollis ENSFALG00000008455 I
ENSFALG00000011861 Ficedula albicollis ENSFALG00000011861 I
ENSGMOG00000019481 Gadus morhua ENSGMOG00000019481 I
ENSGALG00000019470 Gallus gallus ENSGALG00000019470 I
TCF21 Gallus gallus ENSGALG00000029024 I
msc Gasterosteus aculeatus ENSGACG00000002802 I
tcf21 Gasterosteus aculeatus ENSGACG00000010957 I
Gfo_R006439 Geospiza fortis Gfo_R006439 I
TCF21 Gorilla gorilla ENSGGOG00000005460 I
MSC Gorilla gorilla ENSGGOG00000009955 I
HHAL000695-PA Halyomorpha halys HHAL000695-PA I
TCF21 Homo sapiens ENSG00000118526 D
MSC Homo sapiens ENSG00000178860 D
ENSSTOG00000023733 Ictidomys tridecemlineatus ENSSTOG00000023733 I
ENSSTOG00000024832 Ictidomys tridecemlineatus ENSSTOG00000024832 I
ENSLACG00000005024 Latimeria chalumnae ENSLACG00000005024 I
ENSLACG00000014348 Latimeria chalumnae ENSLACG00000014348 I
ENSLOCG00000003912 Lepisosteus oculatus ENSLOCG00000003912 I
ENSLOCG00000016232 Lepisosteus oculatus ENSLOCG00000016232 I
LotgiG99224 Lottia gigantea LotgiG99224 I
MSC Loxodonta africana ENSLAFG00000002649 I
TCF21 Loxodonta africana ENSLAFG00000009507 I
LLOJ001927 Lutzomyia longipalpis LLOJ001927 I
ENSP00000321445 Macaca fascicularis ENSP00000321445 I
ENSP00000356857 Macaca fascicularis ENSP00000356857 I
MSC Macaca mulatta ENSMMUG00000000947 I
TCF21 Macaca mulatta ENSMMUG00000002871 I
ENSMEUG00000005491 Macropus eugenii ENSMEUG00000005491 I
TCF21 Meleagris gallopavo ENSMGAG00000013117 I
MCOS_0000023201 Mesocestoides corti MCOS_0000023201 I
ENSMICG00000014144 Microcebus murinus ENSMICG00000014144 I
MSC Monodelphis domestica ENSMODG00000007225 I
TCF21 Monodelphis domestica ENSMODG00000017516 I
ENSMPUG00000010593 Mustela putorius furo ENSMPUG00000010593 I
ENSMPUG00000014798 Mustela putorius furo ENSMPUG00000014798 I
Msc Mus musculus ENSMUSG00000025930 D
Tcf21 Mus musculus ENSMUSG00000045680 D
Myotis_brandtii_TCF21_10035690 Myotis brandtii Myotis_brandtii_TCF21_10035690 I
MSC Myotis lucifugus ENSMLUG00000008572 I
TCF21 Myotis lucifugus ENSMLUG00000009194 I
ENSNLEG00000011452 Nomascus leucogenys ENSNLEG00000011452 I
ENSNLEG00000014647 Nomascus leucogenys ENSNLEG00000014647 I
Ogr02938 Ophisaurus gracilis Ogr02938 I
ENSONIG00000000446 Oreochromis niloticus ENSONIG00000000446 I
ENSONIG00000014278 Oreochromis niloticus ENSONIG00000014278 I
TCF21 Ornithorhynchus anatinus ENSOANG00000013098 I
MSC Oryctolagus cuniculus ENSOCUG00000007208 I
TCF21 Oryctolagus cuniculus ENSOCUG00000017761 I
msc Oryzias latipes ENSORLG00000008030 I
tcf21 Oryzias latipes ENSORLG00000016491 I
MSC Otolemur garnettii ENSOGAG00000013827 I
TCF21 Otolemur garnettii ENSOGAG00000034073 I
ENSOARG00000004844 Ovis aries ENSOARG00000004844 I
ENSOARG00000014623 Ovis aries ENSOARG00000014623 I
TCF21 Pan troglodytes ENSPTRG00000018622 I
MSC Pan troglodytes ENSPTRG00000020339 I
ENSPANG00000022301 Papio anubis ENSPANG00000022301 I
ENSPANG00000024238 Papio anubis ENSPANG00000024238 I
ENSPSIG00000003604 Pelodiscus sinensis ENSPSIG00000003604 I
ENSPMAG00000000379 Petromyzon marinus ENSPMAG00000000379 I
PPAI008462 Phlebotomus papatasi PPAI008462 I
ENSPFOG00000010821 Poecilia formosa ENSPFOG00000010821 I
ENSPFOG00000020725 Poecilia formosa ENSPFOG00000020725 I
ENSPPYG00000017022 Pongo abelii ENSPPYG00000017022 I
ENSPPYG00000018665 Pongo abelii ENSPPYG00000018665 I
MSC Procavia capensis ENSPCAG00000004330 I
ENSPCAG00000006459 Procavia capensis ENSPCAG00000006459 I
MSC Pteropus vampyrus ENSPVAG00000009083 I
TCF21 Pteropus vampyrus ENSPVAG00000009085 I
Msc Rattus norvegicus ENSRNOG00000007540 I
Tcf21 Rattus norvegicus ENSRNOG00000016700 I
RPRC001590 Rhodnius prolixus RPRC001590 I
ENSSHAG00000002801 Sarcophilus harrisii ENSSHAG00000002801 I
ENSSHAG00000004870 Sarcophilus harrisii ENSSHAG00000004870 I
SPU_012008 Strongylocentrotus purpuratus SPU_012008 I
ENSSSCG00000004174 Sus scrofa ENSSSCG00000004174 I
MSC Sus scrofa ENSSSCG00000006187 I
TASK_0000025401 Taenia asiatica TASK_0000025401 I
TsM_000945000 Taenia solium TsM_000945000 I
MSC Taeniopygia guttata ENSTGUG00000011502 I
TCF21 Taeniopygia guttata ENSTGUG00000011548 I
tcf21 Takifugu rubripes ENSTRUG00000003919 I
msc Takifugu rubripes ENSTRUG00000012425 I
msc Tetraodon nigroviridis ENSTNIG00000008188 I
tcf21 Tetraodon nigroviridis ENSTNIG00000016326 I
MSC Tupaia belangeri ENSTBEG00000014659 I
TCF21 Tursiops truncatus ENSTTRG00000009645 I
MSC Tursiops truncatus ENSTTRG00000017260 I
MSC Vicugna pacos ENSVPAG00000000378 I
TCF21 Vicugna pacos ENSVPAG00000006271 I
tcf21.L Xenopus laevis XB-GENE-484809 I
tcf21 Xenopus tropicalis XB-GENE-484805 I
msc Xenopus tropicalis XB-GENE-978233 I
ENSXMAG00000004322 Xiphophorus maculatus ENSXMAG00000004322 I
ENSXMAG00000010332 Xiphophorus maculatus ENSXMAG00000010332 I