evm.TU.supercontig_43.109 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_43.109 T258250_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_43.109 MADS box 12 62

Links

Other MADS box family TFs
Other Carica papaya TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
bHLH071 Arabidopsis lyrata fgenesh2_kg.8__126__AT5G46690.1 N
BHLH71 Arabidopsis thaliana AT5G46690 N
BHLH57 Arabidopsis thaliana AT4G01460 N
Bostr.7365s0007 Boechera stricta Bostr.7365s0007 N
Bo9g004020 Brassica oleracea Bo9g004020 N
Bo9g065460 Brassica oleracea Bo9g065460 N
Bo7g075600 Brassica oleracea Bo7g075600 N
Bra017533 Brassica rapa Bra017533 N
Bra025007 Brassica rapa Bra025007 N
Bra037414 Brassica rapa Bra037414 N
Cagra.10175s0007 Capsella grandiflora Cagra.10175s0007 N
Cagra.0751s0031 Capsella grandiflora Cagra.0751s0031 N
Carubv10026748m.g Capsella rubella Carubv10026748m.g N
Carubv10001470m.g Capsella rubella Carubv10001470m.g N
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N
Thhalv10028815m.g Eutrema salsugineum Thhalv10028815m.g N
Thhalv10000961m.g Eutrema salsugineum Thhalv10000961m.g N
MLOC_10595 Hordeum vulgare MLOC_10595 N
GSMUA_Achr10G19180_001 Musa acuminata GSMUA_Achr10G19180_001 N
e_gw1.519.9.1 Physcomitrella patens e_gw1.519.9.1 N
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N