CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_43.109
(
Carica papaya
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
evm.TU.supercontig_43.109
T258250_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_43.109
MADS box
12
62
RETKEQRAVTFSKRRRGLFNKAAELCVLCDFQVAVLVSSPNPAKLNKFYTF
Links
Other
MADS box
family TFs
Other
Carica papaya
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI001225
Acyrthosiphon pisum
ACYPI001225
I
ACYPI009607
Acyrthosiphon pisum
ACYPI009607
I
AAEL006419
Aedes aegypti
AAEL006419
I
ENSAMEG00000018082
Ailuropoda melanoleuca
ENSAMEG00000018082
I
Alligator_sinensis_CCG006987.1
Alligator sinensis
Alligator_sinensis_CCG006987.1
I
ENSAPLG00000007512
Anas platyrhynchos
ENSAPLG00000007512
I
RBPJ
Anolis carolinensis
ENSACAG00000014578
I
AALB007981
Anopheles albimanus
AALB007981
I
AARA009493
Anopheles arabiensis
AARA009493
I
AATE009298
Anopheles atroparvus
AATE009298
I
ACOM040639
Anopheles coluzzii
ACOM040639
I
ACUA014515
Anopheles culicifacies
ACUA014515
I
ADAC001896
Anopheles darlingi
ADAC001896
I
ADIR011431
Anopheles dirus
ADIR011431
I
AEPI005106
Anopheles epiroticus
AEPI005106
I
AFAF012186
Anopheles farauti
AFAF012186
I
AGAP008935
Anopheles gambiae
AGAP008935
I
AMAM009373
Anopheles maculatus
AMAM009373
I
AMEC017285
Anopheles melas
AMEC017285
I
AMEM004324
Anopheles merus
AMEM004324
I
AMIN005880
Anopheles minimus
AMIN005880
I
AQUA011533
Anopheles quadriannulatus
AQUA011533
I
ASIS021327
Anopheles sinensis
ASIS021327
I
ASTEI01929
Anopheles stephensi
ASTEI01929
I
GB45655
Apis mellifera
GB45655
I
Afo_R009248
Aptenodytes forsteri
Afo_R009248
I
ENSAMXG00000010835
Astyanax mexicanus
ENSAMXG00000010835
I
ENSAMXG00000011180
Astyanax mexicanus
ENSAMXG00000011180
I
ACEP17167
Atta cephalotes
ACEP17167
I
BGIBMGA003113
Bombyx mori
BGIBMGA003113
I
ENSBTAP00000004696-D1
Bos grunniens
ENSBTAP00000004696-D1
I
RBPJ
Bos taurus
ENSBTAG00000003602
I
fgenesh2_pg.scaffold_60000013
Branchiostoma floridae
fgenesh2_pg.scaffold_60000013
I
fgenesh2_pg.scaffold_82000019
Branchiostoma floridae
fgenesh2_pg.scaffold_82000019
I
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
Brh_R001357
Buceros rhinoceros
Brh_R001357
I
RBPJ
Callithrix jacchus
ENSCJAG00000021033
I
Aan_R011115
Calypte anna
Aan_R011115
I
Cflo_01916--XP_397309.1_APIME
Camponotus floridanus
Cflo_01916--XP_397309.1_APIME
I
RBPJ
Canis familiaris
ENSCAFG00000016387
I
CapteG179039
Capitella teleta
CapteG179039
I
RBPJ
Cavia porcellus
ENSCPOG00000007041
I
Cmyd_10010997
Chelonia mydas
Cmyd_10010997
I
RBPJ
Choloepus hoffmanni
ENSCHOG00000001582
I
CLEC005205
Cimex lectularius
CLEC005205
I
CGI_10018383
Crassostrea gigas
CGI_10018383
I
CpipJ_CPIJ004183
Culex pipiens
CpipJ_CPIJ004183
I
CPIJ004183
Culex quinquefasciatus
CPIJ004183
I
KGM_08407
Danaus plexippus
KGM_08407
I
rbpja
Danio rerio
ENSDARG00000003398
I
rbpjb
Danio rerio
ENSDARG00000052091
I
DAPPUDRAFT_98470
Daphnia pulex
DAPPUDRAFT_98470
I
RBPJ
Dasypus novemcinctus
ENSDNOG00000035383
I
YQE_03219
Dendroctonus ponderosae
YQE_03219
I
Rbpj
Dipodomys ordii
ENSDORG00000006352
I
nDi.2.2.2.g05496
Dirofilaria immitis
nDi.2.2.2.g05496
N
GF14905
Drosophila ananassae
FBgn0091930
I
GG25142
Drosophila erecta
FBgn0117267
I
GH10915
Drosophila grimshawi
FBgn0118396
I
Su(H)
Drosophila melanogaster
FBgn0004837
D
GI13259
Drosophila mojavensis
FBgn0136016
I
GL26026
Drosophila persimilis
FBgn0163608
I
GA25242
Drosophila pseudoobscura
FBgn0246623
I
GA25243
Drosophila pseudoobscura
FBgn0246624
I
GM15894
Drosophila sechellia
FBgn0170810
I
Su(H)
Drosophila simulans
FBgn0027417
I
GJ11880
Drosophila virilis
FBgn0199134
I
GE20814
Drosophila yakuba
FBgn0238107
I
RBPJ
Equus caballus
ENSECAG00000019257
I
RBPJ
Erinaceus europaeus
ENSEEUG00000009686
I
D915_08967
Fasciola hepatica
D915_08967
I
RBPJ
Felis catus
ENSFCAG00000030363
I
ENSFALG00000009154
Ficedula albicollis
ENSFALG00000009154
I
ENSGMOG00000004951
Gadus morhua
ENSGMOG00000004951
I
ENSGMOG00000006156
Gadus morhua
ENSGMOG00000006156
I
RBPJ
Gallus gallus
ENSGALG00000014365
I
rbpja
Gasterosteus aculeatus
ENSGACG00000015888
I
Gfo_R010339
Geospiza fortis
Gfo_R010339
I
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
RBPJ
Gorilla gorilla
ENSGGOG00000004582
I
HHAL001644-PA
Halyomorpha halys
HHAL001644-PA
I
Hsal_09918--XP_397309.1_APIME
Harpegnathos saltator
Hsal_09918--XP_397309.1_APIME
I
HMEL017244
Heliconius melpomene
HMEL017244
I
RBPJ
Homo sapiens
ENSG00000168214
D
ENSSTOG00000004547
Ictidomys tridecemlineatus
ENSSTOG00000004547
I
ISCW010197
Ixodes scapularis
ISCW010197
I
ENSLACG00000007296
Latimeria chalumnae
ENSLACG00000007296
I
ENSLOCG00000009731
Lepisosteus oculatus
ENSLOCG00000009731
I
LDEC018359
Leptinotarsa decemlineata
LDEC018359
I
LotgiG159505
Lottia gigantea
LotgiG159505
I
RBPJ
Loxodonta africana
ENSLAFG00000000410
I
LCUP003485
Lucilia cuprina
LCUP003485
I
LLOJ000759
Lutzomyia longipalpis
LLOJ000759
I
ENSP00000354528
Macaca fascicularis
ENSP00000354528
I
RBPJ
Macaca mulatta
ENSMMUG00000015828
I
MESCA005881
Megaselia scalaris
MESCA005881
I
RBPJ
Meleagris gallopavo
ENSMGAG00000012418
I
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
RBPJ
Monodelphis domestica
ENSMODG00000000129
I
MDOA002342
Musca domestica
MDOA002342
I
ENSMPUG00000016715
Mustela putorius furo
ENSMPUG00000016715
I
Rbpj
Mus musculus
ENSMUSG00000039191
D
Myotis_brandtii_RBPJ_10027377
Myotis brandtii
Myotis_brandtii_RBPJ_10027377
I
RBPJ
Myotis lucifugus
ENSMLUG00000017187
I
NV17858
Nasonia vitripennis
NV17858
I
NV17967
Nasonia vitripennis
NV17967
I
NECAME_17145
Necator americanus
NECAME_17145
I
ENSNLEG00000016895
Nomascus leucogenys
ENSNLEG00000016895
I
Ocbimv22031643m.g
Octopus bimaculoides
Ocbimv22031643m.g
I
nOo.2.0.1.g00014
Onchocerca ochengi
nOo.2.0.1.g00014
N
WBGene00242124
Onchocerca volvulus
WBGene00242124
N
Ogr02745
Ophisaurus gracilis
Ogr02745
I
ENSONIG00000008873
Oreochromis niloticus
ENSONIG00000008873
I
ENSONIG00000009281
Oreochromis niloticus
ENSONIG00000009281
I
RBPJ
Ornithorhynchus anatinus
ENSOANG00000006699
I
RBPJ
Oryctolagus cuniculus
ENSOCUG00000013449
I
rbpja
Oryzias latipes
ENSORLG00000004882
I
RBPJ
Otolemur garnettii
ENSOGAG00000007913
I
ENSOARG00000008166
Ovis aries
ENSOARG00000008166
I
RBPJ
Pan troglodytes
ENSPTRG00000015968
I
ENSPANG00000021176
Papio anubis
ENSPANG00000021176
I
PHUM462870
Pediculus humanus
PHUM462870
I
ENSPSIG00000016822
Pelodiscus sinensis
ENSPSIG00000016822
I
PPAI000792
Phlebotomus papatasi
PPAI000792
I
ENSPFOG00000012004
Poecilia formosa
ENSPFOG00000012004
I
Pvit_10584
Pogona vitticeps
Pvit_10584
I
ENSPPYG00000014652
Pongo abelii
ENSPPYG00000014652
I
scaffold595-EXSNAP2012.9
Pristionchus exspectatus
scaffold595-EXSNAP2012.9
I
RBPJ
Pteropus vampyrus
ENSPVAG00000014199
I
Rbpj
Rattus norvegicus
ENSRNOG00000007797
I
Rbpj
Rattus norvegicus
ENSRNOG00000046327
I
RPRC014254
Rhodnius prolixus
RPRC014254
I
Sakowv30027441m.g
Saccoglossus kowalevskii
Sakowv30027441m.g
I
ENSSHAG00000003329
Sarcophilus harrisii
ENSSHAG00000003329
I
SCUD_0000326701
Schistosoma curassoni
SCUD_0000326701
I
Sjc_0108400
Schistosoma japonicum
Sjc_0108400
I
SMRZ_0000802101
Schistosoma margrebowiei
SMRZ_0000802101
I
SMTD_0001089601
Schistosoma mattheei
SMTD_0001089601
I
SINV15808
Solenopsis invicta
SINV15808
I
RBPJ
Sorex araneus
ENSSARG00000001169
I
SMAR001432
Strigamia maritima
SMAR001432
I
RBPJ
Sus scrofa
ENSSSCG00000022155
I
RBPJ
Taeniopygia guttata
ENSTGUG00000009245
I
RBPJ
Takifugu rubripes
ENSTRUG00000014798
I
ENSTSYG00000001894
Tarsius syrichta
ENSTSYG00000001894
I
tetur04g02700
Tetranychus urticae
tetur04g02700
I
tetur04g02730
Tetranychus urticae
tetur04g02730
I
tetur11g00180
Tetranychus urticae
tetur11g00180
I
RBPJ
Tetraodon nigroviridis
ENSTNIG00000012994
I
TCLT_0000154801
Thelazia callipaeda
TCLT_0000154801
N
TC014468
Tribolium castaneum
TC014468
I
TRE_0000568701
Trichobilharzia regenti
TRE_0000568701
I
RBPJ
Tupaia belangeri
ENSTBEG00000002676
I
RBPJ
Tursiops truncatus
ENSTTRG00000009022
I
Tal_R001466
Tyto alba
Tal_R001466
I
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
AAB05479
Xenopus laevis
AAB05479
I
rbpj.S
Xenopus laevis
XB-GENE-865998
I
rbpj
Xenopus tropicalis
XB-GENE-490756
I
ENSXMAG00000009877
Xiphophorus maculatus
ENSXMAG00000009877
I
ENSXMAG00000012207
Xiphophorus maculatus
ENSXMAG00000012207
I
L798_15068
Zootermopsis nevadensis
L798_15068
I