Lus10032108.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10032108.g T258613_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10032108 MADS box 10 58

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL007040 Aedes aegypti AAEL007040 I 0.000
AALB009220 Anopheles albimanus AALB009220 I 0.000
AARA004356 Anopheles arabiensis AARA004356 I 0.000
AATE018583 Anopheles atroparvus AATE018583 N 0.000
ACHR004078 Anopheles christyi ACHR004078 I 0.000
ACOM036889 Anopheles coluzzii ACOM036889 N 0.000
ACUA000036 Anopheles culicifacies ACUA000036 I 0.000
AEPI003479 Anopheles epiroticus AEPI003479 I 0.000
AFUN005474 Anopheles funestus AFUN005474 I 0.000
AGAP002506 Anopheles gambiae AGAP002506 I 0.000
AMEC020337 Anopheles melas AMEC020337 N 0.000
AMEM017856 Anopheles merus AMEM017856 I 0.000
AMIN002518 Anopheles minimus AMIN002518 I 0.000
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.000
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.000
ACEP16409 Atta cephalotes ACEP16409 I 0.000
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.000
CLEC011116 Cimex lectularius CLEC011116 I 0.000
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.000
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.000
GG18309 Drosophila erecta FBgn0110525 I 0.000
GH11831 Drosophila grimshawi FBgn0119310 I 0.000
lz Drosophila melanogaster FBgn0002576 D 0.000
GI14398 Drosophila mojavensis FBgn0137150 I 0.000
GL16499 Drosophila persimilis FBgn0154103 I 0.000
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.000
GM22478 Drosophila sechellia FBgn0177348 I 0.000
GD16951 Drosophila simulans FBgn0188530 I 0.000
GJ18742 Drosophila virilis FBgn0205894 I 0.000
GK25373 Drosophila willistoni FBgn0227332 I 0.000
GE17788 Drosophila yakuba FBgn0235232 I 0.000
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.000
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.000
MDOA010744 Musca domestica MDOA010744 I 0.000
PHUM333300 Pediculus humanus PHUM333300 I 0.000
PPAI005889 Phlebotomus papatasi PPAI005889 I 0.000
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.000
RPRC005391 Rhodnius prolixus RPRC005391 I 0.000
SINV13317 Solenopsis invicta SINV13317 I 0.000
TC005796 Tribolium castaneum TC005796 I 0.000