Pavir.Gb00606 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Gb00606 T258914_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Gb00606.1.p MADS box 102 124
Pavir.Gb00606.2.p MADS box 91 113
Pavir.Gb00606.3.p MADS box 102 124
Pavir.Gb00606.4.p MADS box 91 113

Links

Other MADS box family TFs
Other Panicum virgatum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006904 Ailuropoda melanoleuca ENSAMEG00000006904 N
ZNF408 Bos taurus ENSBTAG00000027557 N
ZNF408 Callithrix jacchus ENSCJAG00000019859 N
ZNF408 Canis familiaris ENSCAFG00000009143 N
ENSCSAG00000005681 Chlorocebus sabaeus ENSCSAG00000005681 N
ZNF408 Choloepus hoffmanni ENSCHOG00000009909 N
ZNF408 Dasypus novemcinctus ENSDNOG00000047669 N
Zfp408 Dipodomys ordii ENSDORG00000000387 N
ZNF408 Equus caballus ENSECAG00000010878 N
ZNF408 Erinaceus europaeus ENSEEUG00000010466 N
ZNF408 Felis catus ENSFCAG00000029105 N
ZNF408 Gorilla gorilla ENSGGOG00000010152 N
ZNF408 Homo sapiens ENSG00000175213 N
ENSSTOG00000005114 Ictidomys tridecemlineatus ENSSTOG00000005114 N
ZNF408 Loxodonta africana ENSLAFG00000027848 N
ENSP00000309606 Macaca fascicularis ENSP00000309606 N
ZNF408 Macaca mulatta ENSMMUG00000019673 N
Myotis_brandtii_ZNF408_10025512 Myotis brandtii Myotis_brandtii_ZNF408_10025512 N
ZNF408 Myotis lucifugus ENSMLUG00000017629 N
ENSNLEG00000014132 Nomascus leucogenys ENSNLEG00000014132 N
ZNF408 Ochotona princeps ENSOPRG00000009225 N
ZNF408 Oryctolagus cuniculus ENSOCUG00000010953 N
ZNF408 Otolemur garnettii ENSOGAG00000034080 N
ZNF408 Pan troglodytes ENSPTRG00000003551 N
ENSPANG00000025797 Papio anubis ENSPANG00000025797 N
ENSPPYG00000003318 Pongo abelii ENSPPYG00000003318 N
ZNF408 Procavia capensis ENSPCAG00000014001 N
ZNF408 Pteropus vampyrus ENSPVAG00000015791 N
ZNF408 Sus scrofa ENSSSCG00000023097 N