Thhalv10002808m.g (Eutrema salsugineum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Thhalv10002808m.g T259101_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10002808m MADS box 40 84

Links

Other MADS box family TFs
Other Eutrema salsugineum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_8.51 Carica papaya evm.TU.supercontig_8.51 N
evm.TU.supercontig_9.294 Carica papaya evm.TU.supercontig_9.294 N
Cla011016 Citrullus lanatus Cla011016 N
Ciclev10016736m.g Citrus clementina Ciclev10016736m.g N
Cucsa.094760 Cucumis sativus Cucsa.094760 N
GLYMA15G03470 Glycine max GLYMA15G03470 N
GLYMA13G41920 Glycine max GLYMA13G41920 N
Gorai.N002500 Gossypium raimondii Gorai.N002500 N
MDP0000846736 Malus domestica MDP0000846736 N
cassava19692.m1 Manihot esculenta cassava19692.m1 N
cassava27410.m1 Manihot esculenta cassava27410.m1 N
cassava41407.m1 Manihot esculenta cassava41407.m1 N
MTR_2g098880 Medicago truncatula MTR_2g098880 N
POPTR_0007s01940 Populus trichocarpa POPTR_0007s01940 N
POPTR_0002s24030 Populus trichocarpa POPTR_0002s24030 N
Pm022169 Prunus mume Pm022169 N
PRUPE_ppa010254mg Prunus persica PRUPE_ppa010254mg N
30178.m000862 Ricinus communis 30178.m000862 N
SapurV1A.0071s0650 Salix purpurea SapurV1A.0071s0650 N
SapurV1A.0834s0150 Salix purpurea SapurV1A.0834s0150 N
TCM_020030 Theobroma cacao TCM_020030 N
TCM_002654 Theobroma cacao TCM_002654 N
VIT_05s0102g00410 Vitis vinifera VIT_05s0102g00410 N
VIT_00s0174g00140 Vitis vinifera VIT_00s0174g00140 N