mecp2.S (Xenopus laevis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 XB-GENE-494744 T261681_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecp2
M00806_2.00 		Mus musculus
NNNNNHAHNN
NNDTDNNNNN		 PBM
Weirauch et al.(2013)
pTH3054 		0.943 0.943
MECP2
M09257_2.00 		Homo sapiens
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_HUMAN.H11MO.0.C 		0.943 0.943
Mecp2
M09259_2.00 		Mus musculus
SCCGGRR
YYCCGGS		 Misc
Kulakovskiy et al.(2013)
MECP2_MOUSE.H11MO.0.C 		0.943 0.943
MECP2
M11032_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_01 		0.943 0.943
MECP2
M11033_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_02 		0.943 0.943
MECP2
M11034_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4_01 		0.943 0.943
MECP2
M11035_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MECP2_Q4 		0.943 0.943
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAD02651 MBD 94 163
AAD03736 MBD 94 163

Links

Other MBD family TFs
Other Xenopus laevis TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010194 Ailuropoda melanoleuca ENSAMEG00000010194 N 0.000
Alligator_sinensis_CCG012013.1 Alligator sinensis Alligator_sinensis_CCG012013.1 N 0.000
ENSAPLG00000015688 Anas platyrhynchos ENSAPLG00000015688 N 0.000
BAZ2B Anolis carolinensis ENSACAG00000010585 N 0.000
Afo_R003860 Aptenodytes forsteri Afo_R003860 N 0.000
ENSAMXG00000004622 Astyanax mexicanus ENSAMXG00000004622 N 0.000
ENSAMXG00000009932 Astyanax mexicanus ENSAMXG00000009932 N 0.000
ENSBTAP00000053510-D1 Bos grunniens ENSBTAP00000053510-D1 N 0.000
BAZ2B Bos taurus ENSBTAG00000020654 N 0.000
BAZ2B Callithrix jacchus ENSCJAG00000015052 N 0.000
Aan_R012052 Calypte anna Aan_R012052 N 0.000
BAZ2B Canis familiaris ENSCAFG00000009433 N 0.000
BAZ2B Cavia porcellus ENSCPOG00000015233 N 0.000
ENSCSAG00000015843 Chlorocebus sabaeus ENSCSAG00000015843 N 0.000
BAZ2B Choloepus hoffmanni ENSCHOG00000007941 N 0.000
BAZ2B Danio rerio ENSDARG00000082979 N 0.000
baz2ba Danio rerio ENSDARG00000057782 N 0.000
BAZ2B Dasypus novemcinctus ENSDNOG00000006145 N 0.000
Baz2b Dipodomys ordii ENSDORG00000005595 N 0.000
BAZ2B Equus caballus ENSECAG00000012235 N 0.000
BAZ2B Felis catus ENSFCAG00000007573 N 0.000
ENSFALG00000003242 Ficedula albicollis ENSFALG00000003242 N 0.000
BAZ2B Gallus gallus ENSGALG00000012579 N 0.000
Gfo_R005657 Geospiza fortis Gfo_R005657 N 0.000
BAZ2B Homo sapiens ENSG00000123636 N 0.000
ENSLACG00000002050 Latimeria chalumnae ENSLACG00000002050 N 0.000
ENSLOCG00000006024 Lepisosteus oculatus ENSLOCG00000006024 N 0.000
BAZ2B Loxodonta africana ENSLAFG00000014380 N 0.000
BAZ2B Macaca mulatta ENSMMUG00000006182 N 0.000
BAZ2B Meleagris gallopavo ENSMGAG00000012953 N 0.000
BAZ2B Microcebus murinus ENSMICG00000013967 N 0.000
BAZ2B Monodelphis domestica ENSMODG00000005005 N 0.000
Baz2b Mus musculus ENSMUSG00000026987 N 0.000
Myotis_brandtii_BAZ2B_10035557 Myotis brandtii Myotis_brandtii_BAZ2B_10035557 N 0.000
BAZ2B Myotis lucifugus ENSMLUG00000001182 N 0.000
ENSNLEG00000001067 Nomascus leucogenys ENSNLEG00000001067 N 0.000
Ogr09813 Ophisaurus gracilis Ogr09813 N 0.000
ENSONIG00000008939 Oreochromis niloticus ENSONIG00000008939 N 0.000
BAZ2B Ornithorhynchus anatinus ENSOANG00000006146 N 0.000
BAZ2B Oryctolagus cuniculus ENSOCUG00000015150 N 0.000
ENSOARG00000007352 Ovis aries ENSOARG00000007352 N 0.000
BAZ2B Pan troglodytes ENSPTRG00000012563 N 0.000
ENSPANG00000009095 Papio anubis ENSPANG00000009095 N 0.000
ENSPSIG00000013064 Pelodiscus sinensis ENSPSIG00000013064 N 0.000
ENSPFOG00000015860 Poecilia formosa ENSPFOG00000015860 N 0.000
ENSPFOG00000024462 Poecilia formosa ENSPFOG00000024462 N 0.000
Pvit_15950 Pogona vitticeps Pvit_15950 N 0.000
ENSPPYG00000012872 Pongo abelii ENSPPYG00000012872 N 0.000
BAZ2B Pteropus vampyrus ENSPVAG00000013042 N 0.000
Baz2b Rattus norvegicus ENSRNOG00000056984 N 0.000
BAZ2B Sorex araneus ENSSARG00000004075 N 0.000
BAZ2B Sus scrofa ENSSSCG00000015882 N 0.000
BAZ2B Taeniopygia guttata ENSTGUG00000012233 N 0.000
baz2ba Takifugu rubripes ENSTRUG00000017174 N 0.000
ENSTSYG00000001627 Tarsius syrichta ENSTSYG00000001627 N 0.000
baz2ba Tetraodon nigroviridis ENSTNIG00000009472 N 0.000
BAZ2B Tupaia belangeri ENSTBEG00000016991 N 0.000
BAZ2B Tursiops truncatus ENSTTRG00000001866 N 0.000
baz2b Xenopus tropicalis XB-GENE-964622 N 0.000
XP_002933311 Xenopus tropicalis XP_002933311 N 0.000
XP_002933312 Xenopus tropicalis XP_002933312 N 0.000