CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT1G61980
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT1G61980
T262040_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G61980.1
mTERF
88
292
LNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSSKSEKSCQPFPQGNLENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKI
AT1G61980.1
mTERF
284
395
FLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFL
AT1G61980.2
mTERF
88
292
LNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSSKSEKSCQPFPQGNLENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKI
AT1G61980.2
mTERF
284
395
FLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFL
AT1G61980.3
mTERF
88
292
LNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDKSSKSEKSCQPFPQGNLENKIRNLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKI
AT1G61980.3
mTERF
284
395
FLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFL
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.2__267__AT1G61980.1
Arabidopsis lyrata
fgenesh2_kg.2__267__AT1G61980.1
N
0.850
scaffold_200374.1
Arabidopsis lyrata
scaffold_200374.1
N
0.700
AT1G61970
Arabidopsis thaliana
AT1G61970
N
0.750
Bostr.22157s0161
Boechera stricta
Bostr.22157s0161
N
0.827
Bostr.22157s0162
Boechera stricta
Bostr.22157s0162
N
0.717
Bostr.22157s0163
Boechera stricta
Bostr.22157s0163
N
0.711
Bostr.22157s0166
Boechera stricta
Bostr.22157s0166
N
0.825
Cagra.0043s0011
Capsella grandiflora
Cagra.0043s0011
N
0.715
Cagra.0043s0012
Capsella grandiflora
Cagra.0043s0012
N
0.786
Carubv10021445m.g
Capsella rubella
Carubv10021445m.g
N
0.718
Carubv10021598m.g
Capsella rubella
Carubv10021598m.g
N
0.799