CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0043s0014
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.0043s0014
T264606_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0043s0014.1.p
mTERF
91
288
LSLFRSHGFIDSQISCIITDYPELLMVDAENSLGPKLKSLKSRGASSSEFTQIISTVPRILGKKSISVYYDSVKDIIVADQSSNYEFPQGHQGNKIRNVSVLRGLGMPQRLLLHLLVSKSQPVCGKENFDASLKKVVELGFDPTTSKFVVALRMLYQMSEKTIEEKVEVYRSVGFTVDDIWEIFKKTPTVLKVSKKKI
Cagra.0043s0014.1.p
mTERF
275
393
KKTPTVLKVSKKKILNSFETFLGLGFSRAEFLMMVKRYPPCIEYSLESVKRKNEFLVKEMNWQLNSLVLHPQAFGYSMEKRIIPRCNVLKALLSKGLLRKGSKLPSGSSVLSCTDELFL
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.2__266__AT1G61990.1
Arabidopsis lyrata
fgenesh2_kg.2__266__AT1G61990.1
N
0.858
AT1G61990
Arabidopsis thaliana
AT1G61990
N
0.811
Carubv10020367m.g
Capsella rubella
Carubv10020367m.g
N
1.000