CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT1G61990
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT1G61990
T262041_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G61990.1
mTERF
88
287
LSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGKKSITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILK
AT1G61990.1
mTERF
272
390
KKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFL
AT1G61990.2
mTERF
88
287
LSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGKKSITVYYDAVKDIIVADTSSSYELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILK
AT1G61990.2
mTERF
272
390
KKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFL
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.2__266__AT1G61990.1
Arabidopsis lyrata
fgenesh2_kg.2__266__AT1G61990.1
N
0.873
Cagra.0043s0014
Capsella grandiflora
Cagra.0043s0014
N
0.811
Carubv10020367m.g
Capsella rubella
Carubv10020367m.g
N
0.811