CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10025001m.g
(
Eutrema salsugineum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Thhalv10025001m.g
T265226_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10025001m
mTERF
183
387
RKLRAVSRVSELDTEGALRPQTLYLLDLGLTLEQIKTITRKFSAFPYYSLEGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMTFLETLGIDKNQWAKIIYRFPAILTYSRQKLTSTVEFLTQTGLSEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKG
Thhalv10025001m
mTERF
357
472
VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGYGIDEIGIMISRYGALYTFSLKENLTPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVKRSGVRLLLNQVLSLSGVEFE
Thhalv10025019m
mTERF
180
384
RKLRAVSRVSELDTEGALRPQTLYLLDLGLTLEQIKTITRKFSAFPYYSLEGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMTFLETLGIDKNQWAKIIYRFPAILTYSRQKLTSTVEFLTQTGLSEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKG
Thhalv10025019m
mTERF
354
469
VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGYGIDEIGIMISRYGALYTFSLKENLTPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVKRSGVRLLLNQVLSLSGVEFE
Links
Other
mTERF
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_703146.1
Arabidopsis lyrata
scaffold_703146.1
N
0.965
MTERF5
Arabidopsis thaliana
AT4G14605
N
0.959
Bostr.0597s0071
Boechera stricta
Bostr.0597s0071
N
0.880
GLYMA05G15170
Glycine max
GLYMA05G15170
N
0.724
cassava12399.valid.m1
Manihot esculenta
cassava12399.valid.m1
N
0.716
TCM_035780
Theobroma cacao
TCM_035780
N
0.738