CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTERF5
(
Arabidopsis thaliana
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
AT4G14605
T262061_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a putative mitochondrial transcription termination factor whose mutation results in plants that exhibit altered chloroplast morphology and plant growth, and reduced pigmentation of cotyledons, leaves, stems and sepals.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G14605.1
mTERF
178
383
TRKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKG
AT4G14605.1
mTERF
350
468
NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFE
AT4G14605.2
mTERF
178
383
TRKLRAVSRVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKG
AT4G14605.2
mTERF
350
468
NVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEFE
Links
Other
mTERF
family TFs
Other
Arabidopsis thaliana
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_703146.1
Arabidopsis lyrata
scaffold_703146.1
N
0.969
Thhalv10025001m.g
Eutrema salsugineum
Thhalv10025001m.g
N
0.959
Bostr.0597s0071
Boechera stricta
Bostr.0597s0071
N
0.943
cassava12399.valid.m1
Manihot esculenta
cassava12399.valid.m1
N
0.779
GLYMA05G15170
Glycine max
GLYMA05G15170
N
0.711