BGIOSGA035841 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA035841 T266984_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.803 0.851
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00 		Ostreococcus tauri
NRMCCTANN
NNTAGGKYN		 PBM
Weirauch et al.(2014)
pTH9424 		0.702 0.660
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.693 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA035841-PA Myb 5 57

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N
AT3G07565 Arabidopsis thaliana AT3G07565 N
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N
Carubv10014434m.g Capsella rubella Carubv10014434m.g N
Ca_02700 Cicer arietinum Ca_02700 N
Cla012999 Citrullus lanatus Cla012999 N
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N
Cucsa.095530 Cucumis sativus Cucsa.095530 N
gene17671-v1.0-hybrid Fragaria vesca gene17671-v1.0-hybrid N
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N
Lus10027045.g Linum usitatissimum Lus10027045.g N
Lus10025582.g Linum usitatissimum Lus10025582.g N
Lus10025581.g Linum usitatissimum Lus10025581.g N
chr3.CM0106.670.nc Lotus japonicus chr3.CM0106.670.nc N
MDP0000184998 Malus domestica MDP0000184998 N
MDP0000716430 Malus domestica MDP0000716430 N
cassava11792.valid.m1 Manihot esculenta cassava11792.valid.m1 N
cassava11791.valid.m1 Manihot esculenta cassava11791.valid.m1 N
cassava11790.valid.m1 Manihot esculenta cassava11790.valid.m1 N
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N
POPTR_0017s05170 Populus trichocarpa POPTR_0017s05170 N
PRUPE_ppa010592mg Prunus persica PRUPE_ppa010592mg N
30001.m000076 Ricinus communis 30001.m000076 N
SapurV1A.0947s0070 Salix purpurea SapurV1A.0947s0070 N
SapurV1A.1186s0090 Salix purpurea SapurV1A.1186s0090 N
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N
TCM_019960 Theobroma cacao TCM_019960 N
TCM_019968 Theobroma cacao TCM_019968 N