Bo6g097180 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo6g097180 T267435_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.899 0.968
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.899 0.968
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.863 0.914
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.863 0.914
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.753 0.817
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.735 0.785
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.710 0.763
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.707 0.731
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.703 0.742
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.703 0.742
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.703 0.742
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.692 0.667
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.661 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g097180.1 Myb 20 67
Bo6g097180.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

678 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017735 Ailuropoda melanoleuca ENSAMEG00000017735 I
Alligator_sinensis_CCG009270.1 Alligator sinensis Alligator_sinensis_CCG009270.1 I
ENSAPLG00000013409 Anas platyrhynchos ENSAPLG00000013409 I
NFKB2 Anolis carolinensis ENSACAG00000014215 I
Afo_R002575 Aptenodytes forsteri Afo_R002575 I
ENSBTAP00000007904-D1 Bos grunniens ENSBTAP00000007904-D1 I
NFKB2 Bos taurus ENSBTAG00000006017 I
Brh_R009664 Buceros rhinoceros Brh_R009664 I
NFKB2 Callithrix jacchus ENSCJAG00000017928 I
Aan_R011824 Calypte anna Aan_R011824 I
NFKB2 Canis familiaris ENSCAFG00000010155 I
NFKB2 Cavia porcellus ENSCPOG00000004847 I
Cmyd_10006544 Chelonia mydas Cmyd_10006544 I
ENSCSAG00000005442 Chlorocebus sabaeus ENSCSAG00000005442 I
NFKB2 Dasypus novemcinctus ENSDNOG00000032784 I
Nfkb2 Dipodomys ordii ENSDORG00000013409 I
NFKB2 Equus caballus ENSECAG00000019593 I
NFKB2 Felis catus ENSFCAG00000001242 I
ENSFALG00000007271 Ficedula albicollis ENSFALG00000007271 I
NFKB2 Gallus gallus ENSGALG00000005653 I
Gfo_R002459 Geospiza fortis Gfo_R002459 I
NFKB2 Gorilla gorilla ENSGGOG00000006971 I
NFKB2 Homo sapiens ENSG00000077150 D
ENSSTOG00000002191 Ictidomys tridecemlineatus ENSSTOG00000002191 I
NFKB2 Loxodonta africana ENSLAFG00000006805 I
ENSP00000189444 Macaca fascicularis ENSP00000189444 I
NFKB2 Macaca mulatta ENSMMUG00000002990 I
ENSMEUG00000011176 Macropus eugenii ENSMEUG00000011176 I
ENSMGAG00000007084 Meleagris gallopavo ENSMGAG00000007084 I
NFKB2 Microcebus murinus ENSMICG00000011856 I
ENSMPUG00000016882 Mustela putorius furo ENSMPUG00000016882 I
Nfkb2 Mus musculus ENSMUSG00000025225 D
Myotis_brandtii_NFKB2_10025917 Myotis brandtii Myotis_brandtii_NFKB2_10025917 I
NFKB2 Myotis lucifugus ENSMLUG00000006287 I
ENSNLEG00000015079 Nomascus leucogenys ENSNLEG00000015079 I
Ogr18048 Ophisaurus gracilis Ogr18048 I
ENSOANG00000030023 Ornithorhynchus anatinus ENSOANG00000030023 I
NFKB2 Oryctolagus cuniculus ENSOCUG00000005735 I
NFKB2 Otolemur garnettii ENSOGAG00000016379 I
ENSOARG00000000483 Ovis aries ENSOARG00000000483 I
NFKB2 Pan troglodytes ENSPTRG00000002888 I
ENSPANG00000021013 Papio anubis ENSPANG00000021013 I
Pvit_13855 Pogona vitticeps Pvit_13855 I
ENSPPYG00000002599 Pongo abelii ENSPPYG00000002599 I
NFKB2 Procavia capensis ENSPCAG00000011503 I
Nfkb2 Rattus norvegicus ENSRNOG00000019311 I
ENSSHAG00000018852 Sarcophilus harrisii ENSSHAG00000018852 I
NFKB1 Sus scrofa ENSSSCG00000030957 I
NFKB2 Sus scrofa ENSSSCG00000010580 I
NFKB2 Taeniopygia guttata ENSTGUG00000007491 I
NFKB2 Tursiops truncatus ENSTTRG00000008357 I