CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bo9g171130 *(Brassica oleracea)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	Bo9g171130	T267649_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB3R4 M07125_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R4_col_a	0.901	0.978
Q948S5_TOBAC M11074_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA2_01	0.781	0.863
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	0.757	0.827
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	0.757	0.827
PK12011.1 M01279_2.00	Cannabis sativa	HAACGGHHNN	NNDDCCGTTD	PBM Lambert et al.(2019) pTH11423	0.725	0.835
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bo9g171130.1	Myb	37	83	RGQWTAEEDEILTKAVHSFKGKNWKKIAEFFKDRTDVQCLHRWQKVL
Bo9g171130.1	Myb	89	135	KGPWTKEEDEMIVQLIQKYGPKKWSTIARFLPGRIGKQCRERWHNHL
Bo9g171130.1	Myb	141	185	KEAWTQEEELLLIRAHQIYGNRWAELTKFLPGRSDNGIKNHWHSS

Links
Other Myb/SANT family TFs
Other *Brassica oleracea* TFs

100 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000000447	Ailuropoda melanoleuca	ENSAMEG00000000447	N	0.000
ENSBTAG00000010252	Bos taurus	ENSBTAG00000010252	N	0.000
ZNF397	Callithrix jacchus	ENSCJAG00000021000	N	0.000
ZNF397	Canis familiaris	ENSCAFG00000017918	N	0.000
ENSCSAG00000017904	Chlorocebus sabaeus	ENSCSAG00000017904	N	0.000
Zfp397	Dipodomys ordii	ENSDORG00000009608	N	0.000
ZNF397	Equus caballus	ENSECAG00000015789	N	0.000
ZNF397	Felis catus	ENSFCAG00000023533	N	0.000
ZNF397	Homo sapiens	ENSG00000186812	N	0.000
ENSSTOG00000023511	Ictidomys tridecemlineatus	ENSSTOG00000023511	N	0.000
ENSLAFG00000018574	Loxodonta africana	ENSLAFG00000018574	N	0.000
ENSP00000331577	Macaca fascicularis	ENSP00000331577	N	0.000
ZNF397	Macaca mulatta	ENSMMUG00000020530	N	0.000
ENSMPUG00000001181	Mustela putorius furo	ENSMPUG00000001181	N	0.000
Myotis_brandtii_ZNF397_10017291	Myotis brandtii	Myotis_brandtii_ZNF397_10017291	N	0.000
ENSMLUG00000016482	Myotis lucifugus	ENSMLUG00000016482	N	0.000
ENSNLEG00000006278	Nomascus leucogenys	ENSNLEG00000006278	N	0.000
ZNF397	Oryctolagus cuniculus	ENSOCUG00000007099	N	0.000
ZNF397	Otolemur garnettii	ENSOGAG00000029778	N	0.000
ENSPANG00000006799	Papio anubis	ENSPANG00000006799	N	0.000
ZNF397	Pteropus vampyrus	ENSPVAG00000017450	N	0.000
ENSSSCG00000003739	Sus scrofa	ENSSSCG00000003739	N	0.000
ZNF397	Tupaia belangeri	ENSTBEG00000014907	N	0.000
ZNF397	Tursiops truncatus	ENSTTRG00000013486	N	0.000