CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pir_contig_225-fgenesh-gene-0.2
(
Pythium irregulare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
maker-pir_contig_225-fgenesh-gene-0.2
T274127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPI00000017384
Myb
46
91
KRWTAEQDEALRQAVNELGHRNWMAVAERVPGRDNAQCLQRWNKVL
EPrPI00000017384
Myb
97
142
KGPWSVDEDNLLMETMLKGYDSWREVAAQIPGRTAKQCRERWRNRL
EPrPI00000017384
Myb
159
202
PFTEEEDSIIEQAYEKLGNRWTQIAELLPGRTEDSVKLRWKTLN
Links
Other
Myb/SANT
family TFs
Other
Pythium irregulare
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_036830
Albugo laibachii
ALNC14_036830
N
estExt_Genewise1Plus.C_50397
Phytophthora capsici
estExt_Genewise1Plus.C_50397
N
PITG_00988
Phytophthora infestans
PITG_00988
N
fgenesh_scip_prom.46568.4159
Phytophthora kernoviae
fgenesh_scip_prom.46568.4159
N
fgenesh_scip_prom.28083.3613
Phytophthora lateralis
fgenesh_scip_prom.28083.3613
N
F443_05796
Phytophthora parasitica
F443_05796
N
Phyra94941
Phytophthora ramorum
Phyra94941
N
Physo127096
Phytophthora sojae
Physo127096
N
snap_masked-par_contig_1902-abinit-gene-0.8
Pythium arrhenomanes
snap_masked-par_contig_1902-abinit-gene-0.8
N
maker-pir_contig_290-fgenesh-gene-0.10
Pythium irregulare
maker-pir_contig_290-fgenesh-gene-0.10
N
maker-piw_contig_1077-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_1077-fgenesh-gene-0.0
N
PYU1_G001895
Pythium ultimum
PYU1_G001895
N
maker-pve_contig_56-snap-gene-0.44
Pythium vexans
maker-pve_contig_56-snap-gene-0.44
N