snap_masked-par_contig_1902-abinit-gene-0.8 (Pythium arrhenomanes)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 snap_masked-par_contig_1902-abinit-gene-0.8 T279991_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This gene encodes a member of the ATP-binding cassette (ABC) transporter superfamily. The encoded protein functions as a chloride channel, making it unique among members of this protein family, and controls ion and water secretion and absorption in epithelial tissues. Channel activation is mediated by cycles of regulatory domain phosphorylation, ATP-binding by the nucleotide-binding domains, and ATP hydrolysis. Mutations in this gene cause cystic fibrosis, the most common lethal genetic disorder in populations of Northern European descent. The most frequently occurring mutation in cystic fibrosis, DeltaF508, results in impaired folding and trafficking of the encoded protein. Multiple pseudogenes have been identified in the human genome. [provided by RefSeq, Aug 2017]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPR00000021905 Myb 24 69
EPrPR00000021905 Myb 75 120

Links

Other Myb/SANT family TFs
Other Pythium arrhenomanes TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PYU1_G001895 Pythium ultimum PYU1_G001895 N 0.838
maker-pir_contig_290-fgenesh-gene-0.10 Pythium irregulare maker-pir_contig_290-fgenesh-gene-0.10 N 0.838
maker-piw_contig_1077-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_1077-fgenesh-gene-0.0 N 0.838
maker-pag1_scaffold_286-snap-gene-0.20 Pythium aphanidermatum maker-pag1_scaffold_286-snap-gene-0.20 N 0.817
maker-pve_contig_56-snap-gene-0.44 Pythium vexans maker-pve_contig_56-snap-gene-0.44 N 0.796
fgenesh_scip_prom.28083.3613 Phytophthora lateralis fgenesh_scip_prom.28083.3613 N 0.792
Phyra94941 Phytophthora ramorum Phyra94941 N 0.792
Physo127096 Phytophthora sojae Physo127096 N 0.787
PITG_00988 Phytophthora infestans PITG_00988 N 0.784
ALNC14_036830 Albugo laibachii ALNC14_036830 N 0.779
F443_05796 Phytophthora parasitica F443_05796 N 0.759
estExt_Genewise1Plus.C_50397 Phytophthora capsici estExt_Genewise1Plus.C_50397 N 0.741
fgenesh_scip_prom.46568.4159 Phytophthora kernoviae fgenesh_scip_prom.46568.4159 N 0.741