PGSC0003DMG400014550 (Solanum tuberosum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PGSC0003DMG400014550 T277609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.858 0.892
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.858 0.892
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.803 0.839
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.803 0.839
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.784 0.817
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.730 0.796
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.714 0.785
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.713 0.731
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.713 0.731
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.713 0.731
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.707 0.720
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.689 0.645
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.662 0.667
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400037715 Myb 3 28
PGSC0003DMT400037716 Myb 21 68
PGSC0003DMT400037716 Myb 74 119

Links

Other Myb/SANT family TFs
Other Solanum tuberosum TFs

750 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g07732 Acanthocheilonema viteae nAv.1.0.1.g07732 I 0.000
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.000
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.000
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.000
ENSAMEG00000015874 Ailuropoda melanoleuca ENSAMEG00000015874 I 0.000
ENSAMEG00000016564 Ailuropoda melanoleuca ENSAMEG00000016564 I 0.000
Alligator_sinensis_CCG005029.1 Alligator sinensis Alligator_sinensis_CCG005029.1 I 0.000
Alligator_sinensis_CCG014301.1 Alligator sinensis Alligator_sinensis_CCG014301.1 I 0.000
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.000
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.000
AALB005039 Anopheles albimanus AALB005039 I 0.000
AARA007412 Anopheles arabiensis AARA007412 I 0.000
ACHR003797 Anopheles christyi ACHR003797 I 0.000
ACOM024661 Anopheles coluzzii ACOM024661 I 0.000
ACUA007180 Anopheles culicifacies ACUA007180 I 0.000
AEPI000589 Anopheles epiroticus AEPI000589 I 0.000
AFUN005441 Anopheles funestus AFUN005441 I 0.000
AGAP006108 Anopheles gambiae AGAP006108 I 0.000
AMEC011905 Anopheles melas AMEC011905 I 0.000
AMEM010049 Anopheles merus AMEM010049 I 0.000
AMIN009954 Anopheles minimus AMIN009954 I 0.000
AQUA011660 Anopheles quadriannulatus AQUA011660 I 0.000
ASTEI02878 Anopheles stephensi ASTEI02878 I 0.000
Afo_R006672 Aptenodytes forsteri Afo_R006672 I 0.000
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.000
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.000
BGIBMGA000526 Bombyx mori BGIBMGA000526 I 0.000
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.000
ENSP00000007699-D1 Bos grunniens ENSP00000007699-D1 I 0.000
ENSP00000389639-D2 Bos grunniens ENSP00000389639-D2 I 0.000
YBX2 Bos taurus ENSBTAG00000009126 I 0.000
YBX3 Bos taurus ENSBTAG00000009663 I 0.000
YBX1 Bos taurus ENSBTAG00000017368 I 0.000
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.000
Bm3781 Brugia malayi Bm3781 I 0.000
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.000
Brh_R010004 Buceros rhinoceros Brh_R010004 I 0.000
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.000
ENSCJAG00000007407 Callithrix jacchus ENSCJAG00000007407 I 0.000
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.000
YBX2 Callithrix jacchus ENSCJAG00000016581 I 0.000
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.000
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.000
ENSCJAG00000031891 Callithrix jacchus ENSCJAG00000031891 I 0.000
ENSCJAG00000032211 Callithrix jacchus ENSCJAG00000032211 I 0.000
ENSCJAG00000033824 Callithrix jacchus ENSCJAG00000033824 I 0.000
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.000
ENSCJAG00000035469 Callithrix jacchus ENSCJAG00000035469 I 0.000
Aan_R001440 Calypte anna Aan_R001440 I 0.000
Aan_R014295 Calypte anna Aan_R014295 I 0.000
Cflo_08983--XP_393344.3_APIME Camponotus floridanus Cflo_08983--XP_393344.3_APIME I 0.000
YBX1 Canis familiaris ENSCAFG00000002541 I 0.000
ENSCAFG00000005162 Canis familiaris ENSCAFG00000005162 I 0.000
YBX3 Canis familiaris ENSCAFG00000013401 I 0.000
ENSCAFG00000016128 Canis familiaris ENSCAFG00000016128 I 0.000
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I 0.000
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I 0.000
ENSCAFG00000017286 Canis familiaris ENSCAFG00000017286 I 0.000
ENSCAFG00000030502 Canis familiaris ENSCAFG00000030502 I 0.000
CapteG105284 Capitella teleta CapteG105284 I 0.000
CapteG121832 Capitella teleta CapteG121832 I 0.000
CapteG166603 Capitella teleta CapteG166603 I 0.000
CapteG48958 Capitella teleta CapteG48958 I 0.000
CapteG58124 Capitella teleta CapteG58124 I 0.000
YBX2 Cavia porcellus ENSCPOG00000009543 I 0.000
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.000
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.000
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.000
ENSCSAG00000001168 Chlorocebus sabaeus ENSCSAG00000001168 I 0.000
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.000
ENSCSAG00000011857 Chlorocebus sabaeus ENSCSAG00000011857 I 0.000
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.000
KGM_01291 Danaus plexippus KGM_01291 I 0.000
ybx1 Danio rerio ENSDARG00000004757 I 0.000
YBX2 Dasypus novemcinctus ENSDNOG00000013746 I 0.000
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.000
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.000
Ybx2 Dipodomys ordii ENSDORG00000010882 I 0.000
nDi.2.2.2.g07679 Dirofilaria immitis nDi.2.2.2.g07679 I 0.000
DME_0000984901 Dracunculus medinensis DME_0000984901 I 0.000
YBX3 Echinops telfairi ENSETEG00000002557 I 0.000
YBX2 Echinops telfairi ENSETEG00000014271 I 0.000
EEL_0000726801 Elaeophora elaphi EEL_0000726801 I 0.000
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.000
YBX2 Equus caballus ENSECAG00000009996 I 0.000
ENSECAG00000011356 Equus caballus ENSECAG00000011356 I 0.000
YBX3 Equus caballus ENSECAG00000013777 I 0.000
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.000
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.000
ENSEEUG00000007494 Erinaceus europaeus ENSEEUG00000007494 I 0.000
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.000
YBX2 Felis catus ENSFCAG00000018097 I 0.000
ENSFCAG00000022604 Felis catus ENSFCAG00000022604 I 0.000
YBX3 Felis catus ENSFCAG00000027748 I 0.000
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.000
ENSFALG00000010305 Ficedula albicollis ENSFALG00000010305 I 0.000
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.000
YBX1 Gallus gallus ENSGALG00000004848 I 0.000
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.000
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.000
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.000
Gfo_R009480 Geospiza fortis Gfo_R009480 I 0.000
GPUH_0001124501 Gongylonema pulchrum GPUH_0001124501 I 0.000
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.000
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.000
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.000
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.000
HelroG133388 Helobdella robusta HelroG133388 I 0.000
YBX2 Homo sapiens ENSG00000006047 I 0.000
YBX3 Homo sapiens ENSG00000060138 I 0.000
YBX1 Homo sapiens ENSG00000065978 D 0.000
ENSSTOG00000000116 Ictidomys tridecemlineatus ENSSTOG00000000116 I 0.000
ENSSTOG00000002108 Ictidomys tridecemlineatus ENSSTOG00000002108 I 0.000
ENSSTOG00000008630 Ictidomys tridecemlineatus ENSSTOG00000008630 I 0.000
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I 0.000
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I 0.000
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I 0.000
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.000
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.000
ENSLOCG00000013819 Lepisosteus oculatus ENSLOCG00000013819 I 0.000
LDEC002142 Leptinotarsa decemlineata LDEC002142 I 0.000
nLs.2.1.2.g03745 Litomosoides sigmodontis nLs.2.1.2.g03745 I 0.000
LOAG_17966 Loa loa LOAG_17966 I 0.000
LotgiG78612 Lottia gigantea LotgiG78612 I 0.000
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.000
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.000
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.000
YBX1 Loxodonta africana ENSLAFG00000031170 I 0.000
ENSMMUP00000017257 Macaca fascicularis ENSMMUP00000017257 I 0.000
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.000
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.000
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.000
ENSMMUG00000022712 Macaca mulatta ENSMMUG00000022712 I 0.000
ENSMMUG00000032563 Macaca mulatta ENSMMUG00000032563 I 0.000
ENSMEUG00000009893 Macropus eugenii ENSMEUG00000009893 I 0.000
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.000
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.000
ENSMICG00000004602 Microcebus murinus ENSMICG00000004602 I 0.000
YBX2 Microcebus murinus ENSMICG00000012453 I 0.000
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.000
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.000
YBX2 Monodelphis domestica ENSMODG00000017596 I 0.000
YBX3 Monodelphis domestica ENSMODG00000018248 I 0.000
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.000
MDOA013639 Musca domestica MDOA013639 I 0.000
ENSMPUG00000010386 Mustela putorius furo ENSMPUG00000010386 I 0.000
ENSMPUG00000011810 Mustela putorius furo ENSMPUG00000011810 I 0.000
ENSMPUG00000013922 Mustela putorius furo ENSMPUG00000013922 I 0.000
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I 0.000
Ybx2 Mus musculus ENSMUSG00000018554 I 0.000
Ybx1 Mus musculus ENSMUSG00000028639 I 0.000
Ybx3 Mus musculus ENSMUSG00000030189 I 0.000
Myotis_brandtii_YBX1_10016780 Myotis brandtii Myotis_brandtii_YBX1_10016780 I 0.000
Myotis_brandtii_YBX2_10021025 Myotis brandtii Myotis_brandtii_YBX2_10021025 I 0.000
YBX2 Myotis lucifugus ENSMLUG00000004686 I 0.000
YBX3 Myotis lucifugus ENSMLUG00000007476 I 0.000
ENSMLUG00000024638 Myotis lucifugus ENSMLUG00000024638 I 0.000
ENSNLEG00000008063 Nomascus leucogenys ENSNLEG00000008063 I 0.000
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.000
YBX2 Ochotona princeps ENSOPRG00000013773 I 0.000
nOo.2.0.1.g01690 Onchocerca ochengi nOo.2.0.1.g01690 I 0.000
WBGene00247949 Onchocerca volvulus WBGene00247949 I 0.000
Ogr02658 Ophisaurus gracilis Ogr02658 I 0.000
Ogr10632 Ophisaurus gracilis Ogr10632 I 0.000
T265_06248 Opisthorchis viverrini T265_06248 I 0.000
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.000
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.000
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.000
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.000
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.000
YBX3 Oryctolagus cuniculus ENSOCUG00000001889 I 0.000
ENSOCUG00000028047 Oryctolagus cuniculus ENSOCUG00000028047 I 0.000
ybx1 Oryzias latipes ENSORLG00000004225 I 0.000
YBX2 Otolemur garnettii ENSOGAG00000004392 I 0.000
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.000
ENSOGAG00000014939 Otolemur garnettii ENSOGAG00000014939 I 0.000
ENSOGAG00000024681 Otolemur garnettii ENSOGAG00000024681 I 0.000
ENSOGAG00000030360 Otolemur garnettii ENSOGAG00000030360 I 0.000
ENSOGAG00000030653 Otolemur garnettii ENSOGAG00000030653 I 0.000
ENSOGAG00000032929 Otolemur garnettii ENSOGAG00000032929 I 0.000
ENSOARG00000011562 Ovis aries ENSOARG00000011562 I 0.000
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.000
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.000
YBX3 Pan troglodytes ENSPTRG00000004681 I 0.000
YBX1 Pan troglodytes ENSPTRG00000006456 I 0.000
YBX2 Pan troglodytes ENSPTRG00000008673 I 0.000
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.000
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.000
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.000
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.000
ENSPANG00000019627 Papio anubis ENSPANG00000019627 I 0.000
ENSPANG00000024250 Papio anubis ENSPANG00000024250 I 0.000
PHUM156710 Pediculus humanus PHUM156710 I 0.000
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.000
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.000
ENSPSIG00000012364 Pelodiscus sinensis ENSPSIG00000012364 I 0.000
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.000
Pvit_07856 Pogona vitticeps Pvit_07856 I 0.000
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.000
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.000
Ppa-cey-1 Pristionchus pacificus PPA28011 I 0.000
YBX3 Procavia capensis ENSPCAG00000001397 I 0.000
YBX2 Procavia capensis ENSPCAG00000008019 I 0.000
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.000
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.000
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.000
Ybx2 Rattus norvegicus ENSRNOG00000017117 I 0.000
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.000
LOC100912427 Rattus norvegicus ENSRNOG00000032902 I 0.000
RPRC001993 Rhodnius prolixus RPRC001993 I 0.000
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.000
ENSSHAG00000003262 Sarcophilus harrisii ENSSHAG00000003262 I 0.000
ENSSHAG00000007786 Sarcophilus harrisii ENSSHAG00000007786 I 0.000
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.000
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.000
SINV21160 Solenopsis invicta SINV21160 I 0.000
YBX2 Sorex araneus ENSSARG00000000488 I 0.000
ENSSARG00000012628 Sorex araneus ENSSARG00000012628 I 0.000
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.000
YBX3 Sus scrofa ENSSSCG00000000633 I 0.000
YBX2 Sus scrofa ENSSSCG00000017938 I 0.000
ENSSSCG00000028485 Sus scrofa ENSSSCG00000028485 I 0.000
ENSSSCG00000030357 Sus scrofa ENSSSCG00000030357 I 0.000
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.000
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.000
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.000
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.000
TC013925 Tribolium castaneum TC013925 I 0.000
D918_04890 Trichuris suis D918_04890 I 0.000
YBX2 Tupaia belangeri ENSTBEG00000001266 I 0.000
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.000
YBX1 Tursiops truncatus ENSTTRG00000001353 I 0.000
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.000
YBX2 Tursiops truncatus ENSTTRG00000009780 I 0.000
Tal_R003478 Tyto alba Tal_R003478 I 0.000
Tal_R011198 Tyto alba Tal_R011198 I 0.000
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.000
YBX3 Vicugna pacos ENSVPAG00000000876 I 0.000
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.000
WUBG_03960 Wuchereria bancrofti WUBG_03960 I 0.000
AAH42217 Xenopus laevis AAH42217 I 0.000
AAI30161 Xenopus laevis AAI30161 I 0.000
CAA42778 Xenopus laevis CAA42778 I 0.000
ybx2.L Xenopus laevis XB-GENE-6252609 I 0.000
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.000
ybx1.S Xenopus laevis XB-GENE-865405 I 0.000
ybx3 Xenopus tropicalis XB-GENE-1007558 I 0.000
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.000
ybx2 Xenopus tropicalis XB-GENE-5798907 I 0.000
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.000