CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Myotis_brandtii_YBX2_10021025
(
Myotis brandtii
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
Myotis_brandtii_YBX2_10021025
T165325_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YBX1
M04661_2.00
Homo sapiens
GRTGGWACR
YGTWCCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX
0.958
0.958
YBX1
M10411_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q3
0.958
0.958
YBX1
M10412_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$YB1_Q4
0.958
0.958
YBX1
M04662_2.00
Homo sapiens
GRTGKDRCD
HGYHMCAYC
SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX
0.958
0.958
NEMVEDRAFT_v1g104083
M01207_2.00
Nematostella vectensis
NNNDDHRN
NYDHHNNN
PBM
Lambert et al.(2019)
pTH9768
0.750
0.750
cey-1
M01903_2.00
Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN
PBM
Weirauch et al.(2014)
pTH8991
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Myotis_brandtii_YBX2_10021025
CSD
24
75
WNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGP
Links
Other
CSD
family TFs
Other
Myotis brandtii
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
YBX2
Microcebus murinus
ENSMICG00000012453
I
1.000
YBX2
Vicugna pacos
ENSVPAG00000003104
I
1.000
YBX3
Tursiops truncatus
ENSTTRG00000008045
I
0.979
ENSSTOG00000000116
Ictidomys tridecemlineatus
ENSSTOG00000000116
I
0.979
ENSMPUG00000010386
Mustela putorius furo
ENSMPUG00000010386
I
0.979
Cmyd_10003103
Chelonia mydas
Cmyd_10003103
I
0.973
ENSMEUG00000009893
Macropus eugenii
ENSMEUG00000009893
I
0.973
Cmyd_10002115
Chelonia mydas
Cmyd_10002115
I
0.972
ENSCSAG00000001168
Chlorocebus sabaeus
ENSCSAG00000001168
I
0.959
YBX1
Homo sapiens
ENSG00000065978
D
0.959
ENSGGOG00000004758
Gorilla gorilla
ENSGGOG00000004758
I
0.959
CAA42778
Xenopus laevis
CAA42778
I
0.958
YBX1
Vicugna pacos
ENSVPAG00000000068
I
0.958
YBX1
Monodelphis domestica
ENSMODG00000017214
I
0.958
AAI30161
Xenopus laevis
AAI30161
I
0.958
YBX3
Macaca mulatta
ENSMMUG00000022469
I
0.958
ENSMPUG00000013922
Mustela putorius furo
ENSMPUG00000013922
I
0.958
ybx1
Xenopus tropicalis
XB-GENE-480746
I
0.958
ybx1
Tetraodon nigroviridis
ENSTNIG00000011989
I
0.958
Ybx3
Mus musculus
ENSMUSG00000030189
I
0.958
Ybx1
Mus musculus
ENSMUSG00000028639
I
0.958
ybx1
Takifugu rubripes
ENSTRUG00000015333
I
0.958
ENSMMUG00000013136
Macaca mulatta
ENSMMUG00000013136
I
0.958
ENSXMAG00000018674
Xiphophorus maculatus
ENSXMAG00000018674
I
0.958
ENSLACG00000018135
Latimeria chalumnae
ENSLACG00000018135
I
0.958
Pvit_10025
Pogona vitticeps
Pvit_10025
I
0.958
Aan_R001440
Calypte anna
Aan_R001440
I
0.958
YBX2
Gorilla gorilla
ENSGGOG00000007399
I
0.958
ENSPPYG00000004279
Pongo abelii
ENSPPYG00000004279
I
0.958
YBX3
Loxodonta africana
ENSLAFG00000017247
I
0.958
ENSLOCG00000002530
Lepisosteus oculatus
ENSLOCG00000002530
I
0.958
ENSMICG00000014984
Microcebus murinus
ENSMICG00000014984
I
0.958
AAH42217
Xenopus laevis
AAH42217
I
0.958
YBX3
Meleagris gallopavo
ENSMGAG00000014224
I
0.958
YBX1
Meleagris gallopavo
ENSMGAG00000006879
I
0.958
ENSNLEG00000012324
Nomascus leucogenys
ENSNLEG00000012324
I
0.958
ENSOANG00000001663
Ornithorhynchus anatinus
ENSOANG00000001663
I
0.958
YBX1
Pteropus vampyrus
ENSPVAG00000005504
I
0.958
ybx1
Oryzias latipes
ENSORLG00000004225
I
0.958
YBX3
Pteropus vampyrus
ENSPVAG00000006740
I
0.958
ENSONIG00000002062
Oreochromis niloticus
ENSONIG00000002062
I
0.958
Ybx3
Rattus norvegicus
ENSRNOG00000005480
I
0.958
ENSPANG00000010280
Papio anubis
ENSPANG00000010280
I
0.958
ENSPANG00000013156
Papio anubis
ENSPANG00000013156
I
0.958
ENSPFOG00000011441
Poecilia formosa
ENSPFOG00000011441
I
0.958
ENSPSIG00000009247
Pelodiscus sinensis
ENSPSIG00000009247
I
0.958
ENSPSIG00000011017
Pelodiscus sinensis
ENSPSIG00000011017
I
0.958
ENSPANG00000016576
Papio anubis
ENSPANG00000016576
I
0.958
Ybx1
Rattus norvegicus
ENSRNOG00000023786
I
0.958
YBX2
Sorex araneus
ENSSARG00000000488
I
0.958
ENSOARG00000020447
Ovis aries
ENSOARG00000020447
I
0.958
ENSOARG00000020919
Ovis aries
ENSOARG00000020919
I
0.958
YBX3
Taeniopygia guttata
ENSTGUG00000012047
I
0.958
YBX1
Taeniopygia guttata
ENSTGUG00000017262
I
0.958
YBX1
Ornithorhynchus anatinus
ENSOANG00000011725
I
0.958
YBX3
Tupaia belangeri
ENSTBEG00000012570
I
0.958
ybx1.S
Xenopus laevis
XB-GENE-865405
I
0.958
YBX1
Otolemur garnettii
ENSOGAG00000006784
I
0.958
ENSSHAG00000014452
Sarcophilus harrisii
ENSSHAG00000014452
I
0.958
ENSOCUG00000028047
Oryctolagus cuniculus
ENSOCUG00000028047
I
0.958
YBX3
Sus scrofa
ENSSSCG00000000633
I
0.958
YBX3
Gorilla gorilla
ENSGGOG00000001352
I
0.958
ENSLAFG00000007597
Loxodonta africana
ENSLAFG00000007597
I
0.958
YBX1
Cavia porcellus
ENSCPOG00000010888
I
0.958
YBX3
Cavia porcellus
ENSCPOG00000011329
I
0.958
ENSAMEG00000000494
Ailuropoda melanoleuca
ENSAMEG00000000494
I
0.958
ENSCJAG00000021660
Callithrix jacchus
ENSCJAG00000021660
I
0.958
ENSBTAP00000012735-D1
Bos grunniens
ENSBTAP00000012735-D1
I
0.958
ENSGALG00000018512
Gallus gallus
ENSGALG00000018512
I
0.958
ENSCSAG00000008744
Chlorocebus sabaeus
ENSCSAG00000008744
I
0.958
Ybx3
Dipodomys ordii
ENSDORG00000009103
I
0.958
Brh_R007443
Buceros rhinoceros
Brh_R007443
I
0.958
ybx1
Danio rerio
ENSDARG00000004757
I
0.958
Brh_R010004
Buceros rhinoceros
Brh_R010004
I
0.958
ENSCJAG00000003155
Callithrix jacchus
ENSCJAG00000003155
I
0.958
YBX3
Choloepus hoffmanni
ENSCHOG00000011988
I
0.958
ENSAPLG00000004899
Anas platyrhynchos
ENSAPLG00000004899
I
0.958
YBX3
Bos taurus
ENSBTAG00000009663
I
0.958
ENSAPLG00000003147
Anas platyrhynchos
ENSAPLG00000003147
I
0.958
ENSAMXG00000014478
Astyanax mexicanus
ENSAMXG00000014478
I
0.958
ENSAMEG00000009393
Ailuropoda melanoleuca
ENSAMEG00000009393
I
0.958
YBX1
Bos taurus
ENSBTAG00000017368
I
0.958
YBX1
Canis familiaris
ENSCAFG00000002541
I
0.958
ENSP00000228251
Macaca fascicularis
ENSP00000228251
I
0.958
Gfo_R007354
Geospiza fortis
Gfo_R007354
I
0.958
YBX3
Canis familiaris
ENSCAFG00000013401
I
0.958
Gfo_R009480
Geospiza fortis
Gfo_R009480
I
0.958
ENSECAG00000008961
Equus caballus
ENSECAG00000008961
I
0.958
Tal_R011198
Tyto alba
Tal_R011198
I
0.958
ENSFCAG00000022604
Felis catus
ENSFCAG00000022604
I
0.958
YBX3
Felis catus
ENSFCAG00000027748
I
0.958
Aan_R014295
Calypte anna
Aan_R014295
I
0.958
Afo_R006672
Aptenodytes forsteri
Afo_R006672
I
0.958
ENSFALG00000003661
Ficedula albicollis
ENSFALG00000003661
I
0.958
YBX3
Erinaceus europaeus
ENSEEUG00000010415
I
0.958
YBX3
Homo sapiens
ENSG00000060138
I
0.958
ybx1
Gasterosteus aculeatus
ENSGACG00000006447
I
0.958
Afo_R014263
Aptenodytes forsteri
Afo_R014263
I
0.958
YBX1
Gallus gallus
ENSGALG00000004848
I
0.958
YBX3
Equus caballus
ENSECAG00000013777
I
0.958
ENSECAG00000023592
Equus caballus
ENSECAG00000023592
I
0.958
YBX1
Erinaceus europaeus
ENSEEUG00000005657
I
0.958
YBX3
Echinops telfairi
ENSETEG00000002557
I
0.958
ENSOCUG00000024588
Oryctolagus cuniculus
ENSOCUG00000024588
I
0.950
ENSMLUG00000029452
Myotis lucifugus
ENSMLUG00000029452
I
0.950
Tal_R003478
Tyto alba
Tal_R003478
I
0.946
YBX3
Myotis lucifugus
ENSMLUG00000007476
I
0.939
Ogr02658
Ophisaurus gracilis
Ogr02658
I
0.939
ENSSTOG00000002108
Ictidomys tridecemlineatus
ENSSTOG00000002108
I
0.939
ENSP00000389639-D2
Bos grunniens
ENSP00000389639-D2
I
0.939
Myotis_brandtii_YBX1_10016780
Myotis brandtii
Myotis_brandtii_YBX1_10016780
I
0.938
ENSSHAG00000011350
Sarcophilus harrisii
ENSSHAG00000011350
I
0.929
Alligator_sinensis_CCG014301.1
Alligator sinensis
Alligator_sinensis_CCG014301.1
I
0.923
YBX1
Loxodonta africana
ENSLAFG00000031170
I
0.923
YBX2
Loxodonta africana
ENSLAFG00000014006
I
0.922
YBX3
Pan troglodytes
ENSPTRG00000004681
I
0.920
ENSGMOG00000015216
Gadus morhua
ENSGMOG00000015216
I
0.917
Sakowv30002198m.g
Saccoglossus kowalevskii
Sakowv30002198m.g
I
0.917
Pvit_07856
Pogona vitticeps
Pvit_07856
I
0.904
ENSOCUG00000021258
Oryctolagus cuniculus
ENSOCUG00000021258
I
0.902
ENSOCUG00000026608
Oryctolagus cuniculus
ENSOCUG00000026608
I
0.900
ENSCJAG00000031567
Callithrix jacchus
ENSCJAG00000031567
I
0.896
e_gw.440.24.1
Branchiostoma floridae
e_gw.440.24.1
I
0.896
ENSMODG00000022963
Monodelphis domestica
ENSMODG00000022963
I
0.896
ENSCJAG00000033824
Callithrix jacchus
ENSCJAG00000033824
I
0.896
ENSMLUG00000024638
Myotis lucifugus
ENSMLUG00000024638
I
0.878
ENSCJAG00000035469
Callithrix jacchus
ENSCJAG00000035469
I
0.875
ENSGGOG00000023840
Gorilla gorilla
ENSGGOG00000023840
I
0.857
ENSOGAG00000014939
Otolemur garnettii
ENSOGAG00000014939
I
0.854
ACYPI003867
Acyrthosiphon pisum
ACYPI003867
I
0.854
CapteG166603
Capitella teleta
CapteG166603
I
0.854
ENSOCUG00000000147
Oryctolagus cuniculus
ENSOCUG00000000147
I
0.853
ENSFALG00000010305
Ficedula albicollis
ENSFALG00000010305
I
0.852
SINV21160
Solenopsis invicta
SINV21160
I
0.851
ENSOCUG00000022716
Oryctolagus cuniculus
ENSOCUG00000022716
I
0.844
ENSGGOG00000023581
Gorilla gorilla
ENSGGOG00000023581
I
0.837
ENSONIG00000018954
Oreochromis niloticus
ENSONIG00000018954
I
0.833
ENSSTOG00000022212
Ictidomys tridecemlineatus
ENSSTOG00000022212
I
0.833
ENSSTOG00000026413
Ictidomys tridecemlineatus
ENSSTOG00000026413
I
0.833
ENSMPUG00000018977
Mustela putorius furo
ENSMPUG00000018977
I
0.833
ENSCAFG00000016520
Canis familiaris
ENSCAFG00000016520
I
0.833
ENSDNOG00000040947
Dasypus novemcinctus
ENSDNOG00000040947
I
0.833
ENSCAFG00000016523
Canis familiaris
ENSCAFG00000016523
I
0.833
ENSSTOG00000027979
Ictidomys tridecemlineatus
ENSSTOG00000027979
I
0.833
CLEC013418
Cimex lectularius
CLEC013418
I
0.830
YBX2
Oryctolagus cuniculus
ENSOCUG00000015064
I
0.825
AEPI000589
Anopheles epiroticus
AEPI000589
I
0.812
ACUA007180
Anopheles culicifacies
ACUA007180
I
0.812
ACHR003797
Anopheles christyi
ACHR003797
I
0.812
LDEC002142
Leptinotarsa decemlineata
LDEC002142
I
0.812
SPU_003107
Strongylocentrotus purpuratus
SPU_003107
I
0.812
AARA007412
Anopheles arabiensis
AARA007412
I
0.812
AGAP006108
Anopheles gambiae
AGAP006108
I
0.812
ACOM024661
Anopheles coluzzii
ACOM024661
I
0.812
AFUN005441
Anopheles funestus
AFUN005441
I
0.812
ASTEI02878
Anopheles stephensi
ASTEI02878
I
0.812
AMEC011905
Anopheles melas
AMEC011905
I
0.812
ENSOGAG00000030653
Otolemur garnettii
ENSOGAG00000030653
I
0.812
AQUA011660
Anopheles quadriannulatus
AQUA011660
I
0.812
AMEM010049
Anopheles merus
AMEM010049
I
0.812
AMIN009954
Anopheles minimus
AMIN009954
I
0.812
CPIJ002248
Culex quinquefasciatus
CPIJ002248
I
0.811
CpipJ_CPIJ002248
Culex pipiens
CpipJ_CPIJ002248
I
0.811
ENSMPUG00000011810
Mustela putorius furo
ENSMPUG00000011810
I
0.804
ENSSHAG00000007786
Sarcophilus harrisii
ENSSHAG00000007786
I
0.797
ENSOGAG00000030360
Otolemur garnettii
ENSOGAG00000030360
I
0.792
ENSSARG00000012628
Sorex araneus
ENSSARG00000012628
I
0.792
RPRC001993
Rhodnius prolixus
RPRC001993
I
0.792
YBX1
Tursiops truncatus
ENSTTRG00000001353
I
0.780
CapteG48958
Capitella teleta
CapteG48958
I
0.771
CapteG121832
Capitella teleta
CapteG121832
I
0.765
YBX3
Oryctolagus cuniculus
ENSOCUG00000001889
I
0.754
T265_06248
Opisthorchis viverrini
T265_06248
I
0.750
CapteG58124
Capitella teleta
CapteG58124
I
0.750
nOo.2.0.1.g01690
Onchocerca ochengi
nOo.2.0.1.g01690
I
0.750
Bm3781
Brugia malayi
Bm3781
I
0.750
EEL_0000726801
Elaeophora elaphi
EEL_0000726801
I
0.750
WUBG_03960
Wuchereria bancrofti
WUBG_03960
I
0.750
GPUH_0001124501
Gongylonema pulchrum
GPUH_0001124501
I
0.750
nAv.1.0.1.g07732
Acanthocheilonema viteae
nAv.1.0.1.g07732
I
0.750
nDi.2.2.2.g07679
Dirofilaria immitis
nDi.2.2.2.g07679
I
0.750
nLs.2.1.2.g03745
Litomosoides sigmodontis
nLs.2.1.2.g03745
I
0.750
Cmyd_10000339
Chelonia mydas
Cmyd_10000339
I
0.750
WBGene00247949
Onchocerca volvulus
WBGene00247949
I
0.750
LOAG_17966
Loa loa
LOAG_17966
I
0.750
ENSORLG00000018683
Oryzias latipes
ENSORLG00000018683
I
0.750
ENSCJAG00000031891
Callithrix jacchus
ENSCJAG00000031891
I
0.746
ENSSSCG00000028485
Sus scrofa
ENSSSCG00000028485
I
0.742
ENSOGAG00000031268
Otolemur garnettii
ENSOGAG00000031268
I
0.729
ENSCAFG00000005162
Canis familiaris
ENSCAFG00000005162
I
0.724
YBX2
Myotis lucifugus
ENSMLUG00000004686
I
0.723
ENSP00000007699-D1
Bos grunniens
ENSP00000007699-D1
I
0.712
ENSOARG00000011562
Ovis aries
ENSOARG00000011562
I
0.712
YBX2
Tupaia belangeri
ENSTBEG00000001266
I
0.712
ENSNLEG00000008063
Nomascus leucogenys
ENSNLEG00000008063
I
0.712
Ybx2
Mus musculus
ENSMUSG00000018554
I
0.712
YBX2
Sus scrofa
ENSSSCG00000017938
I
0.712
ENSPSIG00000012364
Pelodiscus sinensis
ENSPSIG00000012364
I
0.712
ENSPANG00000024250
Papio anubis
ENSPANG00000024250
I
0.712
YBX2
Ochotona princeps
ENSOPRG00000013773
I
0.712
Ybx2
Rattus norvegicus
ENSRNOG00000017117
I
0.712
ENSSSCG00000030357
Sus scrofa
ENSSSCG00000030357
I
0.712
YBX2
Otolemur garnettii
ENSOGAG00000004392
I
0.712
ENSSTOG00000008630
Ictidomys tridecemlineatus
ENSSTOG00000008630
I
0.712
ENSMMUG00000022712
Macaca mulatta
ENSMMUG00000022712
I
0.712
YBX2
Cavia porcellus
ENSCPOG00000009543
I
0.712
YBX2
Procavia capensis
ENSPCAG00000008019
I
0.712
ENSCAFG00000016128
Canis familiaris
ENSCAFG00000016128
I
0.712
ybx2
Xenopus tropicalis
XB-GENE-5798907
I
0.712
ENSAMEG00000016564
Ailuropoda melanoleuca
ENSAMEG00000016564
I
0.712
YBX2
Bos taurus
ENSBTAG00000009126
I
0.712
Ogr10632
Ophisaurus gracilis
Ogr10632
I
0.712
ENSCSAG00000011857
Chlorocebus sabaeus
ENSCSAG00000011857
I
0.712
YBX2
Felis catus
ENSFCAG00000018097
I
0.712
YBX2
Dasypus novemcinctus
ENSDNOG00000013746
I
0.712
YBX2
Callithrix jacchus
ENSCJAG00000016581
I
0.712
YBX2
Equus caballus
ENSECAG00000009996
I
0.712
Alligator_sinensis_CCG005029.1
Alligator sinensis
Alligator_sinensis_CCG005029.1
I
0.712
NBR_0000795701
Nippostrongylus brasiliensis
NBR_0000795701
I
0.708
TELCIR_06115
Teladorsagia circumcincta
TELCIR_06115
I
0.708
ENSBTAG00000045616
Bos taurus
ENSBTAG00000045616
I
0.708
ACOC_0000576201
Angiostrongylus costaricensis
ACOC_0000576201
I
0.708
ENSOARG00000004633
Ovis aries
ENSOARG00000004633
I
0.708
cey-1
Caenorhabditis elegans
WBGene00000472
D
0.708
ACAC_0000909201
Angiostrongylus cantonensis
ACAC_0000909201
I
0.708
DICVIV_10680
Dictyocaulus viviparus
DICVIV_10680
I
0.708
ENSAMEG00000008685
Ailuropoda melanoleuca
ENSAMEG00000008685
I
0.708
HPBE_0000695301
Heligmosomoides bakeri
HPBE_0000695301
I
0.708