ENSOCUG00000021258 (Oryctolagus cuniculus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSOCUG00000021258 T164685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.927 0.927
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.927 0.927
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.927 0.927
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.927 0.927
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.780 0.780
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000025635 CSD 49 93

Links

Other CSD family TFs
Other Oryctolagus cuniculus TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSOCUG00000024588 Oryctolagus cuniculus ENSOCUG00000024588 I 0.975
ENSMLUG00000029452 Myotis lucifugus ENSMLUG00000029452 I 0.975
Cmyd_10003103 Chelonia mydas Cmyd_10003103 I 0.973
Cmyd_10002115 Chelonia mydas Cmyd_10002115 I 0.972
ENSCJAG00000010572 Callithrix jacchus ENSCJAG00000010572 I 0.951
Tal_R003478 Tyto alba Tal_R003478 I 0.946
ENSPSIG00000009247 Pelodiscus sinensis ENSPSIG00000009247 I 0.927
ENSPPYG00000004279 Pongo abelii ENSPPYG00000004279 I 0.927
ENSPSIG00000011017 Pelodiscus sinensis ENSPSIG00000011017 I 0.927
ENSOARG00000020919 Ovis aries ENSOARG00000020919 I 0.927
ENSOARG00000020447 Ovis aries ENSOARG00000020447 I 0.927
YBX1 Otolemur garnettii ENSOGAG00000006784 I 0.927
ENSONIG00000002062 Oreochromis niloticus ENSONIG00000002062 I 0.927
ENSPANG00000010280 Papio anubis ENSPANG00000010280 I 0.927
YBX1 Ornithorhynchus anatinus ENSOANG00000011725 I 0.927
ybx1 Oryzias latipes ENSORLG00000004225 I 0.927
ENSPFOG00000011441 Poecilia formosa ENSPFOG00000011441 I 0.927
ENSPANG00000013156 Papio anubis ENSPANG00000013156 I 0.927
Ybx3 Mus musculus ENSMUSG00000030189 I 0.927
ENSMLUG00000024638 Myotis lucifugus ENSMLUG00000024638 I 0.927
ENSMMUG00000013136 Macaca mulatta ENSMMUG00000013136 I 0.927
ENSMICG00000014984 Microcebus murinus ENSMICG00000014984 I 0.927
YBX3 Meleagris gallopavo ENSMGAG00000014224 I 0.927
ENSLOCG00000002530 Lepisosteus oculatus ENSLOCG00000002530 I 0.927
YBX1 Meleagris gallopavo ENSMGAG00000006879 I 0.927
YBX3 Macaca mulatta ENSMMUG00000022469 I 0.927
YBX1 Monodelphis domestica ENSMODG00000017214 I 0.927
YBX1 Pteropus vampyrus ENSPVAG00000005504 I 0.927
ENSNLEG00000012324 Nomascus leucogenys ENSNLEG00000012324 I 0.927
Ybx1 Mus musculus ENSMUSG00000028639 I 0.927
ENSMPUG00000013922 Mustela putorius furo ENSMPUG00000013922 I 0.927
ENSMODG00000022963 Monodelphis domestica ENSMODG00000022963 I 0.927
ENSOANG00000001663 Ornithorhynchus anatinus ENSOANG00000001663 I 0.927
Ybx1 Rattus norvegicus ENSRNOG00000023786 I 0.927
Gfo_R007354 Geospiza fortis Gfo_R007354 I 0.927
Pvit_10025 Pogona vitticeps Pvit_10025 I 0.927
ENSP00000389639-D2 Bos grunniens ENSP00000389639-D2 I 0.927
ENSP00000228251 Macaca fascicularis ENSP00000228251 I 0.927
Brh_R007443 Buceros rhinoceros Brh_R007443 I 0.927
ENSBTAP00000012735-D1 Bos grunniens ENSBTAP00000012735-D1 I 0.927
Sakowv30002198m.g Saccoglossus kowalevskii Sakowv30002198m.g I 0.927
AAH42217 Xenopus laevis AAH42217 I 0.927
ybx2.S Xenopus laevis XB-GENE-6254213 I 0.927
ybx1.S Xenopus laevis XB-GENE-865405 I 0.927
ybx1 Xenopus tropicalis XB-GENE-480746 I 0.927
CAA42778 Xenopus laevis CAA42778 I 0.927
AAI30161 Xenopus laevis AAI30161 I 0.927
Afo_R014263 Aptenodytes forsteri Afo_R014263 I 0.927
Aan_R014295 Calypte anna Aan_R014295 I 0.927
YBX3 Sus scrofa ENSSSCG00000000633 I 0.927
YBX3 Tupaia belangeri ENSTBEG00000012570 I 0.927
ENSSHAG00000014452 Sarcophilus harrisii ENSSHAG00000014452 I 0.927
YBX3 Loxodonta africana ENSLAFG00000017247 I 0.927
Ybx3 Rattus norvegicus ENSRNOG00000005480 I 0.927
YBX3 Taeniopygia guttata ENSTGUG00000012047 I 0.927
YBX1 Taeniopygia guttata ENSTGUG00000017262 I 0.927
ENSXMAG00000018674 Xiphophorus maculatus ENSXMAG00000018674 I 0.927
Aan_R001440 Calypte anna Aan_R001440 I 0.927
YBX1 Vicugna pacos ENSVPAG00000000068 I 0.927
ybx1 Takifugu rubripes ENSTRUG00000015333 I 0.927
ybx1 Tetraodon nigroviridis ENSTNIG00000011989 I 0.927
YBX3 Pteropus vampyrus ENSPVAG00000006740 I 0.927
ENSPANG00000016576 Papio anubis ENSPANG00000016576 I 0.927
YBX3 Equus caballus ENSECAG00000013777 I 0.927
ENSECAG00000008961 Equus caballus ENSECAG00000008961 I 0.927
ENSAPLG00000003147 Anas platyrhynchos ENSAPLG00000003147 I 0.927
Ybx3 Dipodomys ordii ENSDORG00000009103 I 0.927
ENSAMXG00000014478 Astyanax mexicanus ENSAMXG00000014478 I 0.927
ENSECAG00000023592 Equus caballus ENSECAG00000023592 I 0.927
YBX3 Echinops telfairi ENSETEG00000002557 I 0.927
YBX3 Erinaceus europaeus ENSEEUG00000010415 I 0.927
YBX1 Erinaceus europaeus ENSEEUG00000005657 I 0.927
ENSAMEG00000009393 Ailuropoda melanoleuca ENSAMEG00000009393 I 0.927
ENSAPLG00000004899 Anas platyrhynchos ENSAPLG00000004899 I 0.927
ybx1 Danio rerio ENSDARG00000004757 I 0.927
YBX3 Canis familiaris ENSCAFG00000013401 I 0.927
ENSCJAG00000021660 Callithrix jacchus ENSCJAG00000021660 I 0.927
ENSCJAG00000003155 Callithrix jacchus ENSCJAG00000003155 I 0.927
YBX3 Choloepus hoffmanni ENSCHOG00000011988 I 0.927
YBX1 Canis familiaris ENSCAFG00000002541 I 0.927
YBX1 Bos taurus ENSBTAG00000017368 I 0.927
ENSCSAG00000008744 Chlorocebus sabaeus ENSCSAG00000008744 I 0.927
YBX3 Bos taurus ENSBTAG00000009663 I 0.927
YBX3 Cavia porcellus ENSCPOG00000011329 I 0.927
YBX1 Cavia porcellus ENSCPOG00000010888 I 0.927
ENSFALG00000003661 Ficedula albicollis ENSFALG00000003661 I 0.927
ENSAMEG00000000494 Ailuropoda melanoleuca ENSAMEG00000000494 I 0.927
ENSLAFG00000007597 Loxodonta africana ENSLAFG00000007597 I 0.927
ENSLACG00000018135 Latimeria chalumnae ENSLACG00000018135 I 0.927
YBX3 Homo sapiens ENSG00000060138 I 0.927
YBX1 Homo sapiens ENSG00000065978 D 0.927
ybx1 Gasterosteus aculeatus ENSGACG00000006447 I 0.927
YBX1 Gallus gallus ENSGALG00000004848 I 0.927
ENSGALG00000018512 Gallus gallus ENSGALG00000018512 I 0.927
YBX3 Felis catus ENSFCAG00000027748 I 0.927
YBX3 Gorilla gorilla ENSGGOG00000001352 I 0.927
ENSOCUG00000026608 Oryctolagus cuniculus ENSOCUG00000026608 I 0.925
Alligator_sinensis_CCG014301.1 Alligator sinensis Alligator_sinensis_CCG014301.1 I 0.923
ENSOCUG00000000147 Oryctolagus cuniculus ENSOCUG00000000147 I 0.912
ENSSHAG00000011350 Sarcophilus harrisii ENSSHAG00000011350 I 0.905
ENSGMOG00000015216 Gadus morhua ENSGMOG00000015216 I 0.902
ENSMPUG00000010386 Mustela putorius furo ENSMPUG00000010386 I 0.902
Myotis_brandtii_YBX2_10021025 Myotis brandtii Myotis_brandtii_YBX2_10021025 I 0.902
e_gw.440.24.1 Branchiostoma floridae e_gw.440.24.1 I 0.902
YBX1 Loxodonta africana ENSLAFG00000031170 I 0.897
ENSCJAG00000035120 Callithrix jacchus ENSCJAG00000035120 I 0.878
ENSCJAG00000035469 Callithrix jacchus ENSCJAG00000035469 I 0.878
YBX2 Gorilla gorilla ENSGGOG00000007399 I 0.878
YBX2 Sorex araneus ENSSARG00000000488 I 0.878
ENSPANG00000005177 Papio anubis ENSPANG00000005177 I 0.878
ENSCJAG00000033824 Callithrix jacchus ENSCJAG00000033824 I 0.878
CapteG166603 Capitella teleta CapteG166603 I 0.878
ENSOCUG00000022716 Oryctolagus cuniculus ENSOCUG00000022716 I 0.867
ENSGGOG00000023840 Gorilla gorilla ENSGGOG00000023840 I 0.857
ENSCJAG00000007407 Callithrix jacchus ENSCJAG00000007407 I 0.854
ENSCJAG00000031567 Callithrix jacchus ENSCJAG00000031567 I 0.854
ACYPI003867 Acyrthosiphon pisum ACYPI003867 I 0.854
Cmyd_10000339 Chelonia mydas Cmyd_10000339 I 0.829
PHUM156710 Pediculus humanus PHUM156710 I 0.829
ENSOGAG00000014939 Otolemur garnettii ENSOGAG00000014939 I 0.829
ENSGGOG00000023581 Gorilla gorilla ENSGGOG00000023581 I 0.814
YBX3 Tursiops truncatus ENSTTRG00000008045 I 0.809
nOo.2.0.1.g01690 Onchocerca ochengi nOo.2.0.1.g01690 I 0.805
nLs.2.1.2.g03745 Litomosoides sigmodontis nLs.2.1.2.g03745 I 0.805
WUBG_03960 Wuchereria bancrofti WUBG_03960 I 0.805
LOAG_17966 Loa loa LOAG_17966 I 0.805
Bm3781 Brugia malayi Bm3781 I 0.805
ENSCAFG00000016520 Canis familiaris ENSCAFG00000016520 I 0.805
GPUH_0001124501 Gongylonema pulchrum GPUH_0001124501 I 0.805
nDi.2.2.2.g07679 Dirofilaria immitis nDi.2.2.2.g07679 I 0.805
WBGene00247949 Onchocerca volvulus WBGene00247949 I 0.805
EEL_0000726801 Elaeophora elaphi EEL_0000726801 I 0.805
MDOA013639 Musca domestica MDOA013639 I 0.805
nAv.1.0.1.g07732 Acanthocheilonema viteae nAv.1.0.1.g07732 I 0.805
RPRC001993 Rhodnius prolixus RPRC001993 I 0.805
ENSDNOG00000040947 Dasypus novemcinctus ENSDNOG00000040947 I 0.805
ENSSTOG00000026413 Ictidomys tridecemlineatus ENSSTOG00000026413 I 0.805
ENSSTOG00000022212 Ictidomys tridecemlineatus ENSSTOG00000022212 I 0.805
ENSONIG00000018954 Oreochromis niloticus ENSONIG00000018954 I 0.805
ENSMPUG00000018977 Mustela putorius furo ENSMPUG00000018977 I 0.805
ENSCAFG00000016523 Canis familiaris ENSCAFG00000016523 I 0.805
ENSSTOG00000027979 Ictidomys tridecemlineatus ENSSTOG00000027979 I 0.805
ENSFCAG00000022604 Felis catus ENSFCAG00000022604 I 0.792
Brh_R010004 Buceros rhinoceros Brh_R010004 I 0.792
Gfo_R009480 Geospiza fortis Gfo_R009480 I 0.792
Tal_R011198 Tyto alba Tal_R011198 I 0.792
ENSOCUG00000028047 Oryctolagus cuniculus ENSOCUG00000028047 I 0.792
ENSSTOG00000000116 Ictidomys tridecemlineatus ENSSTOG00000000116 I 0.792
Afo_R006672 Aptenodytes forsteri Afo_R006672 I 0.792
YBX2 Microcebus murinus ENSMICG00000012453 I 0.787
YBX2 Vicugna pacos ENSVPAG00000003104 I 0.787
CPIJ002248 Culex quinquefasciatus CPIJ002248 I 0.784
ENSMEUG00000009893 Macropus eugenii ENSMEUG00000009893 I 0.784
CpipJ_CPIJ002248 Culex pipiens CpipJ_CPIJ002248 I 0.784
LDEC002142 Leptinotarsa decemlineata LDEC002142 I 0.780
AARA007412 Anopheles arabiensis AARA007412 I 0.780
AALB005039 Anopheles albimanus AALB005039 I 0.780
ACHR003797 Anopheles christyi ACHR003797 I 0.780
AMEC011905 Anopheles melas AMEC011905 I 0.780
AMIN009954 Anopheles minimus AMIN009954 I 0.780
AQUA011660 Anopheles quadriannulatus AQUA011660 I 0.780
ASTEI02878 Anopheles stephensi ASTEI02878 I 0.780
AMEM010049 Anopheles merus AMEM010049 I 0.780
AFUN005441 Anopheles funestus AFUN005441 I 0.780
ACUA007180 Anopheles culicifacies ACUA007180 I 0.780
AEPI000589 Anopheles epiroticus AEPI000589 I 0.780
ACOM024661 Anopheles coluzzii ACOM024661 I 0.780
AGAP006108 Anopheles gambiae AGAP006108 I 0.780
ENSOGAG00000030653 Otolemur garnettii ENSOGAG00000030653 I 0.780
ENSOGAG00000024681 Otolemur garnettii ENSOGAG00000024681 I 0.780
CapteG48958 Capitella teleta CapteG48958 I 0.780
Ogr02658 Ophisaurus gracilis Ogr02658 I 0.776
ENSCSAG00000001168 Chlorocebus sabaeus ENSCSAG00000001168 I 0.776
ENSSTOG00000002108 Ictidomys tridecemlineatus ENSSTOG00000002108 I 0.776
ENSGGOG00000004758 Gorilla gorilla ENSGGOG00000004758 I 0.776
YBX3 Myotis lucifugus ENSMLUG00000007476 I 0.776
Myotis_brandtii_YBX1_10016780 Myotis brandtii Myotis_brandtii_YBX1_10016780 I 0.771
CapteG121832 Capitella teleta CapteG121832 I 0.765
YBX3 Pan troglodytes ENSPTRG00000004681 I 0.760
ENSSARG00000012628 Sorex araneus ENSSARG00000012628 I 0.756
T265_06248 Opisthorchis viverrini T265_06248 I 0.756
L892_g19487 Steinernema scapterisci L892_g19487 I 0.756
L893_g29692 Steinernema glaseri L893_g29692 I 0.756
SPU_003107 Strongylocentrotus purpuratus SPU_003107 I 0.756
ENSOGAG00000030360 Otolemur garnettii ENSOGAG00000030360 I 0.756
HHAL001434-PA Halyomorpha halys HHAL001434-PA I 0.756
ENSOGAG00000031268 Otolemur garnettii ENSOGAG00000031268 I 0.756
ENSAMEG00000008685 Ailuropoda melanoleuca ENSAMEG00000008685 I 0.756
CapteG58124 Capitella teleta CapteG58124 I 0.756
PTRK_0000206200 Parastrongyloides trichosuri PTRK_0000206200 I 0.732
TRE_0001884901 Trichobilharzia regenti TRE_0001884901 I 0.732
SSTP_0000685800 Strongyloides stercoralis SSTP_0000685800 I 0.732
SVE_1573400 Strongyloides venezuelensis SVE_1573400 I 0.732
SPAL_0000982100 Strongyloides papillosus SPAL_0000982100 I 0.732
YBX2 Loxodonta africana ENSLAFG00000014006 I 0.725
CLEC013418 Cimex lectularius CLEC013418 I 0.723
Pvit_07856 Pogona vitticeps Pvit_07856 I 0.712
YBX3 Vicugna pacos ENSVPAG00000000876 I 0.707
SBAD_0000071701 Soboliphyme baturini SBAD_0000071701 I 0.707
ENSMICG00000004602 Microcebus murinus ENSMICG00000004602 I 0.707
RSKR_0000861200 Rhabditophanes kr3021 RSKR_0000861200 I 0.707
TELCIR_06115 Teladorsagia circumcincta TELCIR_06115 I 0.707
ACOC_0000576201 Angiostrongylus costaricensis ACOC_0000576201 I 0.707
ACAC_0000909201 Angiostrongylus cantonensis ACAC_0000909201 I 0.707
Minc12652 Meloidogyne incognita Minc12652 I 0.707
cey-1 Caenorhabditis elegans WBGene00000472 D 0.707
DICVIV_10680 Dictyocaulus viviparus DICVIV_10680 I 0.707
genemark-nMf.1.1.scaf00296-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00296-processed-gene-0.4 I 0.707
MhA1_Contig2458.frz3.gene1 Meloidogyne hapla MhA1_Contig2458.frz3.gene1 I 0.707
ENSORLG00000018683 Oryzias latipes ENSORLG00000018683 I 0.707
HPBE_0000695301 Heligmosomoides bakeri HPBE_0000695301 I 0.707
NBR_0000795701 Nippostrongylus brasiliensis NBR_0000795701 I 0.707
ENSFALG00000010305 Ficedula albicollis ENSFALG00000010305 I 0.704
SINV21160 Solenopsis invicta SINV21160 I 0.702