CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

PGSC0003DMG400021401 *(Solanum tuberosum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	PGSC0003DMG400021401	T277652_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
RAX3 M02700_2.00	Arabidopsis thaliana	SCACCTACCHCCN	NGGDGGTAGGTGS	SELEX Mathelier et al.(2014) MA0576.1	0.792	0.849
RAX3 M11043_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ATMYB84_01	0.792	0.849
MYB80 M07142_2.00	Arabidopsis thaliana	NYYYACCTAMYWHNN	NNDWRKTAGGTRRRN	Dap-seq OMalley et al.(2016) MS188_col_a	0.667	0.656
MYB80 M07143_2.00	Arabidopsis thaliana	YYYACCTAMYTWNNN	NNNWARKTAGGTRRR	Dap-seq OMalley et al.(2016) MS188_colamp_a	0.667	0.656
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
PGSC0003DMT400055148	Myb	14	62	RGPWSPEEDSKLKAYIEQHGTGGNWITLPQKVGLKRCGKSCRLRWLNYL
PGSC0003DMT400055148	Myb	68	113	HGEFTDEEDNIICTLYMSIGSRWSIIAAQLPGRTDNDIKNYWNTRL

Links
Other Myb/SANT family TFs
Other *Solanum tuberosum* TFs