POPTR_0012s08360 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0012s08360 T278424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.672 0.753
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.672 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0012s08360.1 Myb 196 242
POPTR_0012s08360.1 Myb 248 293

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03398 Capronia coronata A1O1_03398 I 0.000
A1O3_07022 Capronia epimyces A1O3_07022 I 0.000
PV04_06196 Capronia semiimmersa PV04_06196 I 0.000
Z519_07621 Cladophialophora bantiana Z519_07621 I 0.000
G647_06695 Cladophialophora carrionii G647_06695 I 0.000
PV07_04224 Cladophialophora immunda PV07_04224 I 0.000
A1O5_07806 Cladophialophora psammophila A1O5_07806 I 0.000
A1O7_05830 Cladophialophora yegresii A1O7_05830 I 0.000
HMPREF1541_01964 Cyphellophora europaea HMPREF1541_01964 I 0.000
A1O9_03904 Exophiala aquamarina A1O9_03904 I 0.000
HMPREF1120_00246 Exophiala dermatitidis HMPREF1120_00246 N 0.000
HMPREF1120_06957 Exophiala dermatitidis HMPREF1120_06957 I 0.000
PV06_01341 Exophiala oligosperma PV06_01341 I 0.000
PV08_00166 Exophiala spinifera PV08_00166 I 0.000
PV05_04966 Exophiala xenobiotica PV05_04966 I 0.000
Z517_04277 Fonsecaea pedrosoi Z517_04277 I 0.000
Z518_08360 Rhinocladiella mackenziei Z518_08360 I 0.000