Si006865m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si006865m.g T279726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G24120
M00729_2.00 		Arabidopsis thaliana
NNKATDCBNN
NNVGHATMNN		 PBM
Chang et al.(2013)
pTH7086 		0.839 0.915
UNE16
M01270_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Lambert et al.(2019)
pTH9967 		0.839 0.915
AT3G24120
M07085_2.00 		Arabidopsis thaliana
HAKATTCB
VGAATMTD		 Dap-seq
OMalley et al.(2016)
At3g24120_col_a 		0.839 0.915
AT3G24120
M07086_2.00 		Arabidopsis thaliana
NDRAAKATTCBHHN
NDDVGAATMTTYHN		 Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a 		0.839 0.915
PHL12
M01077_2.00 		Arabidopsis thaliana
NWKATTCBNN
NNVGAATMWN		 PBM
Sullivan et al.(2014)
pTH7098 		0.797 0.915
PHL12
M07079_2.00 		Arabidopsis thaliana
RGAATATTCYYTWN
NWARRGAATATTCY		 Dap-seq
OMalley et al.(2016)
At3g12730_col_a 		0.797 0.915
PHL12
M07080_2.00 		Arabidopsis thaliana
NNRAAKATTCBHHN
NDDVGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
At3g12730_colamp_a 		0.797 0.915
MYR1
M02309_2.00 		Arabidopsis thaliana
NKATNCBNNN
NNNVGNATMN		 PBM
Weirauch et al.(2014)
pTH8859 		0.795 0.809
PHL11
M07134_2.00 		Arabidopsis thaliana
NNRAAKATTCYHHN
NDDRGAATMTTYNN		 Dap-seq
OMalley et al.(2016)
AT5G45580_col_a 		0.790 0.809
PHL11
M07135_2.00 		Arabidopsis thaliana
NRAAKATTCYHHNN
NNDDRGAATMTTYN		 Dap-seq
OMalley et al.(2016)
AT5G45580_colamp_a 		0.790 0.809
MYR2
M02294_2.00 		Arabidopsis thaliana
NKATDCBNN
NNVGHATMN		 PBM
Weirauch et al.(2014)
pTH7097 		0.789 0.787
MYR2
M07063_2.00 		Arabidopsis thaliana
NNDAAKATTCYHHN
NDDRGAATMTTHNN		 Dap-seq
OMalley et al.(2016)
At3g04030_col_a 		0.789 0.787
MYR2
M07064_2.00 		Arabidopsis thaliana
VRAAKATTCBHWNNN
NNNWDVGAATMTTYB		 Dap-seq
OMalley et al.(2016)
At3g04030_colamp_a 		0.789 0.787
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.772 0.830
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.772 0.830
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.772 0.830
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.772 0.830
Q5IWM2_WHEAT
M11059_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB80_01 		0.718 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si006865m Myb 39 90

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

711 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015606 Ailuropoda melanoleuca ENSAMEG00000015606 I
Alligator_sinensis_CCG013447.1 Alligator sinensis Alligator_sinensis_CCG013447.1 I
ENSP00000357000-D1 Bos grunniens ENSP00000357000-D1 I
USF1 Bos taurus ENSBTAG00000017873 I
USF1 Callithrix jacchus ENSCJAG00000005396 I
USF1 Canis familiaris ENSCAFG00000012689 I
USF1 Cavia porcellus ENSCPOG00000003957 I
ENSCSAG00000002622 Chlorocebus sabaeus ENSCSAG00000002622 I
USF1 Choloepus hoffmanni ENSCHOG00000011010 I
ARHGAP30 Dasypus novemcinctus ENSDNOG00000005811 I
USF1 Equus caballus ENSECAG00000004755 I
USF1 Felis catus ENSFCAG00000012307 I
USF1 Gorilla gorilla ENSGGOG00000003935 I
USF1 Homo sapiens ENSG00000158773 D
ENSSTOG00000012364 Ictidomys tridecemlineatus ENSSTOG00000012364 I
ENSLACG00000001157 Latimeria chalumnae ENSLACG00000001157 I
ENSLOCG00000000641 Lepisosteus oculatus ENSLOCG00000000641 I
USF1 Loxodonta africana ENSLAFG00000011338 I
ENSMMUP00000002682 Macaca fascicularis ENSMMUP00000002682 I
USF1 Macaca mulatta ENSMMUG00000002003 I
ENSMEUG00000009683 Macropus eugenii ENSMEUG00000009683 I
USF1 Microcebus murinus ENSMICG00000007199 I
USF1 Monodelphis domestica ENSMODG00000005443 I
ENSMPUG00000014181 Mustela putorius furo ENSMPUG00000014181 I
Usf1 Mus musculus ENSMUSG00000026641 D
USF1 Myotis lucifugus ENSMLUG00000009179 I
ENSNLEG00000013935 Nomascus leucogenys ENSNLEG00000013935 I
USF1 Ochotona princeps ENSOPRG00000003858 I
Ogr08237 Ophisaurus gracilis Ogr08237 I
ENSONIG00000016360 Oreochromis niloticus ENSONIG00000016360 I
USF1 Oryctolagus cuniculus ENSOCUG00000002352 I
ENSOGAG00000006705 Otolemur garnettii ENSOGAG00000006705 I
ENSOARG00000009376 Ovis aries ENSOARG00000009376 I
ENSOARG00000003162 Ovis aries ENSOARG00000003162 I
USF1 Pan troglodytes ENSPTRG00000001565 I
ENSPANG00000016141 Papio anubis ENSPANG00000016141 I
PHUM287950 Pediculus humanus PHUM287950 I
ENSPSIG00000008116 Pelodiscus sinensis ENSPSIG00000008116 I
Pvit_07548 Pogona vitticeps Pvit_07548 I
ENSPPYG00000000619 Pongo abelii ENSPPYG00000000619 I
USF1 Pteropus vampyrus ENSPVAG00000005489 I
Usf1 Rattus norvegicus ENSRNOG00000004255 I
ENSSHAG00000016124 Sarcophilus harrisii ENSSHAG00000016124 I
USF1 Sus scrofa ENSSSCG00000006371 I
USF1 Tupaia belangeri ENSTBEG00000003164 I
USF1 Tursiops truncatus ENSTTRG00000009151 I
USF1 Vicugna pacos ENSVPAG00000008421 I
B39674 Xenopus laevis B39674 I
usf1.S Xenopus laevis XB-GENE-6255904 I
usf1 Xenopus tropicalis XB-GENE-5918718 I