Si007070m.g (Setaria italica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Si007070m.g T279731_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.696 0.742
myb.Ph3
M02704_2.00 		Petunia x hybrida
WAACNGTYW
WRACNGTTW		 SELEX
Mathelier et al.(2014)
MA0054.1 		0.684 0.731
myb.Ph3
M11070_2.00 		Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY		 Transfac
Matys et al.(2006)
P$MYBPH3_01 		0.684 0.731
myb.Ph3
M11071_2.00 		Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS		 Transfac
Matys et al.(2006)
P$MYBPH3_02 		0.684 0.731
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.679 0.731
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.679 0.731
Q9FR42_TOBAC
M11076_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBAS1_01 		0.677 0.699
MYB101
M07051_2.00 		Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN		 Dap-seq
OMalley et al.(2016)
MYB101_col_a 		0.674 0.710
MYB101
M07052_2.00 		Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH		 Dap-seq
OMalley et al.(2016)
MYB101_colamp_a 		0.674 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si007070m Myb 65 112
Si007070m Myb 118 163

Links

Other Myb/SANT family TFs
Other Setaria italica TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04823 Aegilops tauschii F775_04823 I
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
MLOC_69570 Hordeum vulgare MLOC_69570 I
MDP0000582174 Malus domestica MDP0000582174 N
mgf021550m Mimulus guttatus mgf021550m N
OB05G25260 Oryza brachyantha OB05G25260 N
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N
Pavir.J22834 Panicum virgatum Pavir.J22834 N
29816.m000664 Ricinus communis 29816.m000664 N
30225.m001697 Ricinus communis 30225.m001697 N
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I
TRIUR3_23036 Triticum urartu TRIUR3_23036 N
TRIUR3_28515 Triticum urartu TRIUR3_28515 N
GRMZM2G000818 Zea mays GRMZM2G000818 I
GRMZM2G124715 Zea mays GRMZM2G124715 I