CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si007070m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si007070m.g
T279731_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.696
0.742
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.684
0.731
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.684
0.731
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.684
0.731
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.679
0.731
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.679
0.731
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.677
0.699
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.674
0.710
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.674
0.710
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si007070m
Myb
65
112
KGPWTPEEDKRLKDYVEAHGEGNWNQVQRNAGLNRCGKSCRLRWANHL
Si007070m
Myb
118
163
KGPFDAEEVDKIIKFHMMWGNKWAKMASHLPGRTDNEIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
178 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb10g023665
Sorghum bicolor
Sb10g023665
I
0.909
Pavir.Da00534
Panicum virgatum
Pavir.Da00534
I
0.909
OPUNC06G18670
Oryza punctata
OPUNC06G18670
I
0.783
OBART06G20450
Oryza barthii
OBART06G20450
I
0.779
OGLUM06G21530
Oryza glumaepatula
OGLUM06G21530
I
0.779
OLONG_019401
Oryza longistaminata
OLONG_019401
I
0.779
OMERI06G21070
Oryza meridionalis
OMERI06G21070
I
0.779
ONIVA06G24230
Oryza nivara
ONIVA06G24230
I
0.779
ORGLA06G0168900
Oryza glaberrima
ORGLA06G0168900
I
0.779
ORUFI06G21880
Oryza rufipogon
ORUFI06G21880
I
0.779
F775_08967
Aegilops tauschii
F775_08967
I
0.762
TRIUR3_15006
Triticum urartu
TRIUR3_15006
I
0.762
LPERR06G17110
Leersia perrieri
LPERR06G17110
N
0.745
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.712
Eucgr.A01122
Eucalyptus grandis
Eucgr.A01122
I
0.705
mgf020500m
Mimulus guttatus
mgf020500m
I
0.698
GAM1
Oryza indica
BGIOSGA004670
I
0.696
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.696
OB01G43550
Oryza brachyantha
OB01G43550
I
0.696
OBART01G34660
Oryza barthii
OBART01G34660
I
0.696
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.696
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.696
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.696
GAMYB
Oryza sativa
OS01G0812000
I
0.696
GRMZM2G167088
Zea mays
GRMZM2G167088
N
0.694
GRMZM2G416652
Zea mays
GRMZM2G416652
N
0.694
Ca_25013
Cicer arietinum
Ca_25013
I
0.693
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.691
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.688
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.687
Cla013880
Citrullus lanatus
Cla013880
I
0.687
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.687
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.685
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.685
MTR_2g088170
Medicago truncatula
MTR_2g088170
I
0.685
Ca_07119
Cicer arietinum
Ca_07119
I
0.685
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.684
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.684
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.684
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.684
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.684
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.684
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.684
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.684
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.684
Pavir.J25517
Panicum virgatum
Pavir.J25517
N
0.683
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.682
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.682
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.681
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.681
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.681
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.681
MDP0000179306
Malus domestica
MDP0000179306
I
0.681
MDP0000308617
Malus domestica
MDP0000308617
I
0.681
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.680
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.680
Bra002938
Brassica rapa
Bra002938
I
0.680
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.680
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.680
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.680
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.680
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.680
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.680
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.679
F775_28392
Aegilops tauschii
F775_28392
I
0.679
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.679
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.679
Si006555m.g
Setaria italica
Si006555m.g
I
0.679
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.679
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.679
Pavir.Db00593
Panicum virgatum
Pavir.Db00593
I
0.679
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.679
GRMZM2G004090
Zea mays
GRMZM2G004090
N
0.678
29785.m000932
Ricinus communis
29785.m000932
I
0.678
mgf025568m
Mimulus guttatus
mgf025568m
I
0.678
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.677
MTR_3g011610
Medicago truncatula
MTR_3g011610
I
0.677
Ca_20081
Cicer arietinum
Ca_20081
I
0.677
Cla005406
Citrullus lanatus
Cla005406
I
0.677
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.677
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.677
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.677
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.676
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.676
Traes_2AL_41B71F83C
Triticum aestivum
Traes_2AL_41B71F83C
I
0.675
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.675
MYB101
Arabidopsis thaliana
AT2G32460
D
0.674
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.674
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.674
Bra005597
Brassica rapa
Bra005597
I
0.674
Bra021791
Brassica rapa
Bra021791
I
0.674
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.674
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.674
Pm015094
Prunus mume
Pm015094
I
0.674
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.674
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.674
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.674
MDP0000151688
Malus domestica
MDP0000151688
I
0.674
MDP0000175835
Malus domestica
MDP0000175835
I
0.674
MDP0000176798
Malus domestica
MDP0000176798
I
0.674
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.674
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.674
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.674
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.673
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.673
29823.m000215
Ricinus communis
29823.m000215
I
0.672
cassava11031.m1
Manihot esculenta
cassava11031.m1
I
0.672
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.671
Gorai.013G159200
Gossypium raimondii
Gorai.013G159200
I
0.671
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.671
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.670
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.670
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.670
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.670
Sb10g027280
Sorghum bicolor
Sb10g027280
I
0.670
Si000907m.g
Setaria italica
Si000907m.g
I
0.670
TCM_011907
Theobroma cacao
TCM_011907
I
0.670
TCM_041010
Theobroma cacao
TCM_041010
I
0.670
TCM_044611
Theobroma cacao
TCM_044611
I
0.670
29686.m000890
Ricinus communis
29686.m000890
I
0.670
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.670
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.670
mgf010934m
Mimulus guttatus
mgf010934m
I
0.670
mgf019173m
Mimulus guttatus
mgf019173m
I
0.670
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.670
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.670
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.670
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.670
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.670
Lus10027189.g
Linum usitatissimum
Lus10027189.g
I
0.670
Lus10035275.g
Linum usitatissimum
Lus10035275.g
I
0.670
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.670
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.670
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.670
PK15478.1
Cannabis sativa
PK15478.1
I
0.670
PDK_20s1831811g001
Phoenix dactylifera
PDK_20s1831811g001
I
0.670
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.669
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.668
Ca_21739
Cicer arietinum
Ca_21739
I
0.668
Pavir.Da00077
Panicum virgatum
Pavir.Da00077
I
0.668
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.667
Bra035547
Brassica rapa
Bra035547
I
0.667
GRMZM2G093789
Zea mays
GRMZM2G093789
N
0.667
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.667
TCM_030853
Theobroma cacao
TCM_030853
I
0.667
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.667
Pm016605
Prunus mume
Pm016605
I
0.667
mgf002965m
Mimulus guttatus
mgf002965m
I
0.667
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.667
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.667
Gorai.002G089900
Gossypium raimondii
Gorai.002G089900
I
0.667
MDP0000147309
Malus domestica
MDP0000147309
I
0.667
Thhalv10025350m.g
Eutrema salsugineum
Thhalv10025350m.g
I
0.667
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.666
GLYMA04G15150
Glycine max
GLYMA04G15150
I
0.665
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.665
Bo4g178040
Brassica oleracea
Bo4g178040
I
0.664
BRADI1G32720
Brachypodium distachyon
BRADI1G32720
I
0.664
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.664
LjSGA_026914.2
Lotus japonicus
LjSGA_026914.2
I
0.664
SapurV1A.0014s1240
Salix purpurea
SapurV1A.0014s1240
I
0.663
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.662
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.662
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.662
chr4.LjT12N18.150.nd
Lotus japonicus
chr4.LjT12N18.150.nd
I
0.662
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.661
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.661
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.661
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.661
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.661
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.661
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.661
Cla007782
Citrullus lanatus
Cla007782
I
0.661
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.661
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.661
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.661
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.661
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.661