Solyc04g005600.1 (Solanum lycopersicum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Solyc04g005600.1 T280091_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.741 0.774
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.703 0.699
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.703 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g005600.1.1 Myb 14 61
Solyc04g005600.1.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Solanum lycopersicum TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF274 Bos taurus ENSBTAG00000013353 I
ZNF544 Callithrix jacchus ENSCJAG00000000329 I
ENSCSAG00000019664 Chlorocebus sabaeus ENSCSAG00000019664 I
ZNF274 Dasypus novemcinctus ENSDNOG00000032910 I
ZNF274 Equus caballus ENSECAG00000007526 I
ZNF274 Erinaceus europaeus ENSEEUG00000008228 I
ZNF274 Gorilla gorilla ENSGGOG00000004688 I
ZNF274 Homo sapiens ENSG00000171606 D
ENSP00000409872 Macaca fascicularis ENSP00000409872 I
ZNF274 Macaca mulatta ENSMMUG00000020505 I
ZNF274 Microcebus murinus ENSMICG00000017855 I
ENSMPUG00000008378 Mustela putorius furo ENSMPUG00000008378 I
Zfp110 Mus musculus ENSMUSG00000058638 I
Myotis_brandtii_ZNF274_10003422 Myotis brandtii Myotis_brandtii_ZNF274_10003422 I
ENSNLEG00000011103 Nomascus leucogenys ENSNLEG00000011103 I
ZNF274 Ochotona princeps ENSOPRG00000007383 I
ZNF274 Otolemur garnettii ENSOGAG00000005637 I
ZNF274 Pan troglodytes ENSPTRG00000011583 I
ENSPANG00000012245 Papio anubis ENSPANG00000012245 I
ENSPPYG00000010493 Pongo abelii ENSPPYG00000010493 I
ZNF274 Pteropus vampyrus ENSPVAG00000002938 I
Zfp110 Rattus norvegicus ENSRNOG00000031328 I
ZNF274 Sorex araneus ENSSARG00000001423 I
ZNF274 Sus scrofa ENSSSCG00000003998 I
ZNF274 Tupaia belangeri ENSTBEG00000006394 I
ZNF274 Tursiops truncatus ENSTTRG00000013077 I