Traes_4BS_481D51B66 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_4BS_481D51B66 T281099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.854 0.915
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.800 0.872
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.800 0.872
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.766 0.851
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.766 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BS_481D51B66.2 Myb 105 156

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

337 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BPC6 Arabidopsis thaliana AT5G42520 D
Bostr.3148s0250 Boechera stricta Bostr.3148s0250 I
PK03443.1 Cannabis sativa PK03443.1 I
Cagra.9562s0001 Capsella grandiflora Cagra.9562s0001 I
Carubv10026720m.g Capsella rubella Carubv10026720m.g I
Cla022781 Citrullus lanatus Cla022781 I
Ciclev10001400m.g Citrus clementina Ciclev10001400m.g I
orange1.1g018368m.g Citrus sinensis orange1.1g018368m.g I
Cucsa.159750 Cucumis sativus Cucsa.159750 I
Eucgr.D01054 Eucalyptus grandis Eucgr.D01054 I
Thhalv10006075m.g Eutrema salsugineum Thhalv10006075m.g I
gene08483-v1.0-hybrid Fragaria vesca gene08483-v1.0-hybrid I
GLYMA04G02860 Glycine max GLYMA04G02860 I
GLYMA06G02880 Glycine max GLYMA06G02880 I
Gorai.002G124900 Gossypium raimondii Gorai.002G124900 I
Lus10012389.g Linum usitatissimum Lus10012389.g I
Lus10024313.g Linum usitatissimum Lus10024313.g I
chr1.CM0195.10.nd Lotus japonicus chr1.CM0195.10.nd I
MDP0000933138 Malus domestica MDP0000933138 I
cassava22532.valid.m1 Manihot esculenta cassava22532.valid.m1 I
MTR_1g023660 Medicago truncatula MTR_1g023660 I
Ocbimv22014894m.g Octopus bimaculoides Ocbimv22014894m.g I
POPTR_0005s25720 Populus trichocarpa POPTR_0005s25720 I
POPTR_0002s02820 Populus trichocarpa POPTR_0002s02820 I
Pm006246 Prunus mume Pm006246 I
PRUPE_ppa008316mg Prunus persica PRUPE_ppa008316mg I
30170.m014145 Ricinus communis 30170.m014145 I
SapurV1A.0025s0690 Salix purpurea SapurV1A.0025s0690 I
SapurV1A.0762s0100 Salix purpurea SapurV1A.0762s0100 I
Solyc04g081170.2 Solanum lycopersicum Solyc04g081170.2 I
PGSC0003DMG400003719 Solanum tuberosum PGSC0003DMG400003719 I
TCM_034171 Theobroma cacao TCM_034171 I
VIT_18s0001g13730 Vitis vinifera VIT_18s0001g13730 I