VIT_07s0005g03340 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_07s0005g03340 T281956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.796 0.839
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.796 0.839
MYB15
M07084_2.00 		Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH
DRKTWGGTGRDDNDDNNDNNN		 Dap-seq
OMalley et al.(2016)
ATY19_col_a 		0.747 0.849
MYB15
M02699_2.00 		Arabidopsis thaliana
CCACCTACCSBBG
CVVSGGTAGGTGG		 SELEX
Mathelier et al.(2014)
MA0574.1 		0.747 0.849
MYB15
M11041_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_01 		0.747 0.849
MYB15
M11042_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB15_Q2 		0.747 0.849
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.706 0.742
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.706 0.742
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.693 0.785
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.690 0.763
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.690 0.763
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.681 0.753
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.676 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.676 0.785
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.672 0.753
AtMYB10
M07081_2.00 		Arabidopsis thaliana
YYYACCWAMCHHHHNH
DNDDDDGKTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB10_col_a 		0.667 0.688
AtMYB10
M07082_2.00 		Arabidopsis thaliana
NYYYACCWAMCHHH
DDDGKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB10_colamp_a 		0.667 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_07s0005g03340.t01 Myb 14 61
VIT_07s0005g03340.t01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

732 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_19661 Ancylostoma caninum ANCCAN_19661 I
ANCDUO_20588 Ancylostoma duodenale ANCDUO_20588 I
ANCDUO_21217 Ancylostoma duodenale ANCDUO_21217 I
ACOC_0000053701 Angiostrongylus costaricensis ACOC_0000053701 I
CBN03210 Caenorhabditis brenneri CBN03210 I
CBN17693 Caenorhabditis brenneri CBN17693 I
CBG08311 Caenorhabditis briggsae CBG08311 D
madf-9 Caenorhabditis elegans WBGene00022608 D
CRE11120 Caenorhabditis remanei CRE11120 I
CGOC_0001115201 Cylicostephanus goldi CGOC_0001115201 I
DICVIV_09254 Dictyocaulus viviparus DICVIV_09254 I
HCOI00362100 Haemonchus contortus HCOI00362100 I
HCOI01732900 Haemonchus contortus HCOI01732900 I
HPLM_0002104601 Haemonchus placei HPLM_0002104601 I
HPBE_0002310201 Heligmosomoides bakeri HPBE_0002310201 I
NBR_0000280301 Nippostrongylus brasiliensis NBR_0000280301 I
OESDEN_02601 Oesophagostomum dentatum OESDEN_02601 I
OESDEN_17440 Oesophagostomum dentatum OESDEN_17440 I
scaffold190-EXSNAP2012.38 Pristionchus exspectatus scaffold190-EXSNAP2012.38 I
TELCIR_18230 Teladorsagia circumcincta TELCIR_18230 I